Difference between revisions of "Tiso gene 14646"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINOBUTDEHYDROG-RXN AMINOBUTDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** amino...")
 
(Created page with "Category:Gene == Gene Tiso_gene_14646 == * right end position: ** 2190 * transcription direction: ** NEGATIVE * left end position: ** 1109 * centisome position: ** 20.1015...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINOBUTDEHYDROG-RXN AMINOBUTDEHYDROG-RXN] ==
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== Gene Tiso_gene_14646 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2190
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* common name:
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* transcription direction:
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** aminobutyraldehyde_dehydrogenase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.2.1.19 EC-1.2.1.19]
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** 1109
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* centisome position:
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** 20.101503   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[4-AMINO-BUTYRALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 2 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 4-aminobutanal[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 4-aminobutanoate[c] '''+''' 2 H+[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_17322]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PUTDEG-PWY]], putrescine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PUTDEG-PWY PUTDEG-PWY]
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*** Assignment: ec-number
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* Reaction: [[RXN0-5462]]
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* [[PWY-2]], putrescine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2 PWY-2]
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** Source: [[annotation-in-silico_annotation]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PWY-3]], putrescine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3 PWY-3]
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== Pathways associated ==
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7184]]
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== Reconstruction information  ==
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* [[PWY-7198]]
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* [[annotation]]:
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* [[PWY-6545]]
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** [[pathwaytools]]:
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* [[PWY-7210]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2190}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19105 19105]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1109}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02549 R02549]
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{{#set: centisome position=20.101503    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P49189 P49189]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=aminobutyraldehyde_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.19}}
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{{#set: gene associated=Tiso_gene_17322}}
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{{#set: in pathway=PUTDEG-PWY|PWY-2|PWY-3}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:03, 21 March 2018

Gene Tiso_gene_14646

  • right end position:
    • 2190
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1109
  • centisome position:
    • 20.101503
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14646&oldid=45578"