Difference between revisions of "Tiso gene 9739"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12376 RXN-12376] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_(guanine_-n1)-methyltr...")
 
(Created page with "Category:Gene == Gene Tiso_gene_9739 == * right end position: ** 5342 * transcription direction: ** POSITIVE * left end position: ** 3701 * centisome position: ** 33.33934...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12376 RXN-12376] ==
+
== Gene Tiso_gene_9739 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 5342
−
* common name:
+
* transcription direction:
−
** trna_(guanine_-n1)-methyltransferase
+
** POSITIVE
−
** probable_trna_(guanine_-n_)-dimethyltransferase_1
+
* left end position:
−
* ec number:
+
** 3701
−
** [http://enzyme.expasy.org/EC/2.1.1.216 EC-2.1.1.216]
+
* centisome position:
 +
** 33.33934   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ATCM]]
−
** 1 [[tRNA-Containing-N2-Methylguanine-26]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[tRNA-Containing-N2-dimethylguanine-26]][c]
+
** Source: [[orthology-creinhardtii]]
−
* With common name(s):
+
* Reaction: [[ATCMf]]
−
** 1 an N2-methylguanine26 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an N2dimethylguanine26 in tRNA[c]
+
** Source: [[orthology-creinhardtii]]
−
 
+
* Reaction: [[ATDCM]]
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-creinhardtii]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[ATDCMf]]
−
* [[Tiso_gene_16307]]
+
** Source: [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
* Reaction: [[RXN-11832]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** EXPERIMENTAL_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_9360]]
+
*** Assignment: ec-number
−
** IN-SILICO_ANNOTATION
+
* Reaction: [[RXN-12002]]
−
***EC-NUMBER
+
** Source: [[annotation-in-silico_annotation]]
−
** EXPERIMENTAL_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
== Pathways  ==
+
*** Assignment: ec-number
−
* [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829]
+
** Source: [[orthology-creinhardtii]]
−
** '''3''' reactions found over '''15''' reactions in the full pathway
+
* Reaction: [[RXN-7913]]
−
== Reconstruction information  ==
+
** Source: [[annotation-in-silico_annotation]]
−
* [[annotation]]:
+
*** Assignment: ec-number
−
** [[pathwaytools]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[experimental_annotation]]
+
*** Assignment: ec-number
−
*** [[in-silico_annotation]]
+
* Reaction: [[UMPKf]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways associated ==
 +
* [[PWY-7205]]
 +
* [[PWY-7197]]
 +
* [[PWY-7176]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=5342}}
−
{{#set: common name=trna_(guanine_-n1)-methyltransferase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=probable_trna_(guanine_-n_)-dimethyltransferase_1}}
+
{{#set: left end position=3701}}
−
{{#set: ec number=EC-2.1.1.216}}
+
{{#set: centisome position=33.33934    }}
−
{{#set: gene associated=Tiso_gene_16307|Tiso_gene_9360}}
+
{{#set: reaction associated=ATCM|ATCMf|ATDCM|ATDCMf|RXN-11832|RXN-12002|RXN-7913|UMPKf}}
−
{{#set: in pathway=PWY-6829}}
+
{{#set: pathway associated=PWY-7205|PWY-7197|PWY-7176}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:03, 21 March 2018

Gene Tiso_gene_9739

  • right end position:
    • 5342
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3701
  • centisome position:
    • 33.33934
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9739&oldid=45603"