Difference between revisions of "RXN-14047"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** fad_synthetase * ec numbe...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14047 RXN-14047] == * direction: ** REVERSIBLE * common name: ** Aconitate hydratase 2 (Aconita...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FADSYN-RXN FADSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14047 RXN-14047] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** fad_synthetase
+
** Aconitate hydratase 2 (Aconitase)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.7.2 EC-2.7.7.2]
+
** [http://enzyme.expasy.org/EC/4.2.1.3 EC-4.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FMN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[FAD]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[CIT]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 FMN[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 FAD[c] '''+''' 1 diphosphate[c]
+
** 1 citrate[c] '''<=>''' 1 D-threo-isocitrate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5393]]
+
* Gene: [[Tiso_gene_13007]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_7479]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_5392]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_1086]]
+
−
** [[pantograph]]-[[synechocystis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
 
−
** '''4''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-primary_network]]
−
*** [[creinhardtii]]
+
* Category: [[annotation]]
−
*** [[synechocystis]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17237 17237]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00161 R00161]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01324 R01324]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
+
{{#set: common name=Aconitate hydratase 2 (Aconitase)}}
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
+
{{#set: ec number=EC-4.2.1.3}}
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
+
{{#set: gene associated=Tiso_gene_13007}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: in pathway=}}
−
{{#set: common name=fad_synthetase}}
+
{{#set: reconstruction category=manual|annotation}}
−
{{#set: ec number=EC-2.7.7.2}}
+
{{#set: reconstruction source=manual-primary_network|annotation-experimental_annotation}}
−
{{#set: gene associated=Tiso_gene_5393|Tiso_gene_7479|Tiso_gene_5392|Tiso_gene_1086}}
+
−
{{#set: in pathway=PWY66-366|PWY-6167|PWY-6168|RIBOSYN2-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:04, 21 March 2018

Reaction RXN-14047

  • direction:
    • REVERSIBLE
  • common name:
    • Aconitate hydratase 2 (Aconitase)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 citrate[c] <=> 1 D-threo-isocitrate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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