Difference between revisions of "PWY-5410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=7KAPSYN-RXN 7KAPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=7KAPSYN-RXN 7KAPSYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.3.1.47 EC-2.3.1.47]
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** traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** 13-lipoxygenase and 13-hydroperoxide lyase pathway
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** 13-LOX and 13-HPL pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''9''' reactions in the full pathway
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** 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[CPD-558]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[8-AMINO-7-OXONONANOATE]][c]
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* [[RXN-1321]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 L-alanine[c] '''+''' 1 pimeloyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 coenzyme A[c] '''+''' 1 8-amino-7-oxononanoate[c]
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*** [[Tiso_gene_4463]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_3555]]
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* [http://metacyc.org/META/NEW-IMAGE?object=HYDROHEX-RXN HYDROHEX-RXN]
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** [[pantograph]]-[[athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=LIPOXYGENASE-RXN LIPOXYGENASE-RXN]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11852 RXN-11852]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12299 RXN-12299]
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* [[PWY-6578]], 8-amino-7-oxononanoate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6578 PWY-6578]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1345 RXN-1345]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1346 RXN-1346]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1347 RXN-1347]
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* [[orthology]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1349 RXN-1349]
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20712 20712]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5410 PWY-5410]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-3193}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03210 R03210]
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{{#set: common name=traumatin and (Z)-3-hexen-1-yl acetate biosynthesis}}
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* UNIPROT:
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{{#set: common name=13-lipoxygenase and 13-hydroperoxide lyase pathway|13-LOX and 13-HPL pathway}}
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** [http://www.uniprot.org/uniprot/Q58694 Q58694]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/O84782 O84782]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/Q9Z6Y3 Q9Z6Y3]
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{{#set: completion rate=11.0}}
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** [http://www.uniprot.org/uniprot/P0A4X4 P0A4X4]
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** [http://www.uniprot.org/uniprot/Q9K0U0 Q9K0U0]
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** [http://www.uniprot.org/uniprot/Q9PLE6 Q9PLE6]
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** [http://www.uniprot.org/uniprot/P44422 P44422]
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** [http://www.uniprot.org/uniprot/O25320 O25320]
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** [http://www.uniprot.org/uniprot/P53556 P53556]
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** [http://www.uniprot.org/uniprot/Q9PIJ3 Q9PIJ3]
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** [http://www.uniprot.org/uniprot/O66875 O66875]
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** [http://www.uniprot.org/uniprot/Q9ZLN3 Q9ZLN3]
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** [http://www.uniprot.org/uniprot/Q9Z6L6 Q9Z6L6]
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** [http://www.uniprot.org/uniprot/Q9JT28 Q9JT28]
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** [http://www.uniprot.org/uniprot/P22806 P22806]
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** [http://www.uniprot.org/uniprot/P45487 P45487]
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** [http://www.uniprot.org/uniprot/P74770 P74770]
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** [http://www.uniprot.org/uniprot/P12998 P12998]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.3.1.47}}
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{{#set: gene associated=Tiso_gene_3555}}
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{{#set: in pathway=PWY-6578}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 19:10, 21 March 2018

Pathway PWY-5410

  • taxonomic range:
  • common name:
    • traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
  • Synonym(s):
    • 13-lipoxygenase and 13-hydroperoxide lyase pathway
    • 13-LOX and 13-HPL pathway

Reaction(s) found

1 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5410&oldid=39938"