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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PORPHOBILSYNTH-RXN PORPHOBILSYNTH-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=R-2-Hydroxyacids R-2-Hydroxyacids] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** delta-aminolevulinic_acid_dehydratase_chloroplastic | + | ** an (R)-2-hydroxyacid |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.2.1.24 EC-4.2.1.24]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 2 [[5-AMINO-LEVULINATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[PORPHOBILINOGEN]][c]
| + | * [[2-HALOACID-DEHALOGENASE-RXN]] |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 2 5-aminolevulinate[c] '''=>''' 1 H+[c] '''+''' 2 H2O[c] '''+''' 1 porphobilinogen[c]
| + | * [[RXN-6263]] |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_13382]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
| + | |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | * [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
| + | |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[creinhardtii]]
| + | |
| − | *** [[synechocystis]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | *** [[athaliana]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=an (R)-2-hydroxyacid}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24064 24064]
| + | {{#set: produced by=2-HALOACID-DEHALOGENASE-RXN}} |
| − | * LIGAND-RXN:
| + | {{#set: reversible reaction associated=RXN-6263}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00036 R00036]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P06214 P06214]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P13716 P13716]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q7M315 Q7M315]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P30124 P30124]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JV37 Q9JV37]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P30950 P30950]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q60178 Q60178]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PNU5 Q9PNU5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q59295 Q59295]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q02250 Q02250]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P10518 P10518]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43148 Q43148]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42682 Q42682]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43058 Q43058]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q59643 Q59643]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9S8B1 Q9S8B1]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05373 P05373]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0ACB2 P0ACB2]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42836 Q42836]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43210 P43210]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZNC9 Q9ZNC9]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=delta-aminolevulinic_acid_dehydratase_chloroplastic}} | + | |
| − | {{#set: ec number=EC-4.2.1.24}} | + | |
| − | {{#set: gene associated=Tiso_gene_13382}}
| + | |
| − | {{#set: in pathway=PWY-5189|PWY-5188}}
| + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
