Difference between revisions of "RXN-8391"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16630 RXN-16630] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-pro...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8391 RXN-8391] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-prote...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8391 RXN-8391] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** 3-oxoacyl-(acyl-carrier-protein) | + | ** 3-oxoacyl-(acyl-carrier-protein)_synthase |
| + | ** ORF | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.3.1.179 EC-2.3.1.179] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[MALONYL-ACP]][c] '''+''' 1 [[Delta4-hexadecenoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-petroselinoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a malonyl-[acp][c] '''+''' 1 a (4Z)-hexadec-4-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-petroselinoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_19302]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
| − | ** | + | ** Source: [[annotation-experimental_annotation]] |
| − | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | * Gene: [[Tiso_gene_19303]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
| + | * Gene: [[Tiso_gene_14485]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-5367]], petroselinate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5367 PWY-5367] |
| − | ** '''3''' reactions found over ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[annotation]] | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name=3-oxoacyl-(acyl-carrier-protein)}} | + | {{#set: common name=3-oxoacyl-(acyl-carrier-protein)_synthase}} |
| − | {{#set: ec number=EC- | + | {{#set: common name=ORF}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-2.3.1.179}} |
| − | {{#set: in pathway=PWY- | + | {{#set: gene associated=Tiso_gene_19302|Tiso_gene_19303|Tiso_gene_14485}} |
| + | {{#set: in pathway=PWY-5367}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
| − | |||
Latest revision as of 20:08, 21 March 2018
Contents
Reaction RXN-8391
- direction:
- LEFT-TO-RIGHT
- common name:
- 3-oxoacyl-(acyl-carrier-protein)_synthase
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 MALONYL-ACP[c] + 1 Delta4-hexadecenoyl-ACPs[c] + 1 PROTON[c] => 1 3-oxo-petroselinoyl-ACPs[c] + 1 ACP[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 a malonyl-[acp][c] + 1 a (4Z)-hexadec-4-enoyl-[acp][c] + 1 H+[c] => 1 a 3-oxo-petroselinoyl-[acp][c] + 1 a holo-[acyl-carrier protein][c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_19302
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_19303
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14485
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-5367, petroselinate biosynthesis: PWY-5367
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
