Difference between revisions of "RXN66-483"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14576 RXN-14576] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-483 RXN66-483] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14576 RXN-14576] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-483 RXN66-483] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acyl-coenzyme_a_oxidase
+
** polyketide_synthase
 +
** long_chain_acyl-_synthetase
 +
** ORF
 +
** acyl-_synthetase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15436]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD0-1162]][c]
+
** 1 [[2-Me-Branched-234-Sat-FA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[2-Me-Branched-234-Sat-Fatty-Acyl-CoA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 (5Z)-tetradecenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (2E,5Z)-tetradecenoyl-CoA[c]
+
** 1 a 2-methyl branched 2,3,4-saturated fatty acid[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a 2-methyl branched 2,3,4-saturated fatty acyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18566]]
+
* Gene: [[Tiso_gene_500]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_348]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4191]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_135]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10876]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_7855]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7291]], oleate β-oxidation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7291 PWY-7291]
+
* [[PWY66-387]], fatty acid α-oxidation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acyl-coenzyme_a_oxidase}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: ec number=EC-1.3.3.6}}
+
{{#set: common name=long_chain_acyl-_synthetase}}
−
{{#set: gene associated=Tiso_gene_18566}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=PWY-7291}}
+
{{#set: common name=acyl-_synthetase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-6.2.1.3}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: gene associated=Tiso_gene_500|Tiso_gene_348|Tiso_gene_13394|Tiso_gene_4191|Tiso_gene_135|Tiso_gene_136|Tiso_gene_10876|Tiso_gene_9394|Tiso_gene_7855}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: in pathway=PWY66-387}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:08, 21 March 2018

Reaction RXN66-483

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • ORF
    • acyl-_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-387, fatty acid α-oxidation II: PWY66-387
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-483&oldid=46305"