Difference between revisions of "Tiso gene 10165"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
 
(Created page with "Category:Gene == Gene Tiso_gene_10165 == * right end position: ** 8281 * transcription direction: ** POSITIVE * left end position: ** 7216 * centisome position: ** 82.4026...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] ==
+
== Gene Tiso_gene_10165 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 8281
−
* common name:
+
* transcription direction:
−
** mitochondrial_tyrosyl-trna_synthetase
+
** POSITIVE
−
** methionyl-trna
+
* left end position:
−
** ORF
+
** 7216
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/6.1.1.1 EC-6.1.1.1]
+
** 82.40265   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[NADPH-DEHYDROGENASE-FLAVIN-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[TYR-tRNAs]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c] '''+''' 1 [[AMP]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 ATP[c] '''+''' 1 a tRNAtyr[c] '''+''' 1 L-tyrosine[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-tyrosyl-[tRNAtyr][c] '''+''' 1 AMP[c]
+
* Reaction: [[RXN-12445]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Tiso_gene_10378]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_12171]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4175]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4174]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=8281}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10220 10220]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=7216}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
+
{{#set: centisome position=82.40265    }}
−
* UNIPROT:
+
{{#set: reaction associated=NADPH-DEHYDROGENASE-FLAVIN-RXN|RXN-12445}}
−
** [http://www.uniprot.org/uniprot/P28669 P28669]
+
−
** [http://www.uniprot.org/uniprot/P22326 P22326]
+
−
** [http://www.uniprot.org/uniprot/P36421 P36421]
+
−
** [http://www.uniprot.org/uniprot/P41256 P41256]
+
−
** [http://www.uniprot.org/uniprot/O51343 O51343]
+
−
** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
+
−
** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
+
−
** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
+
−
** [http://www.uniprot.org/uniprot/P47693 P47693]
+
−
** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
+
−
** [http://www.uniprot.org/uniprot/P43836 P43836]
+
−
** [http://www.uniprot.org/uniprot/O83806 O83806]
+
−
** [http://www.uniprot.org/uniprot/Q57834 Q57834]
+
−
** [http://www.uniprot.org/uniprot/P56417 P56417]
+
−
** [http://www.uniprot.org/uniprot/O67632 O67632]
+
−
** [http://www.uniprot.org/uniprot/O58739 O58739]
+
−
** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
+
−
** [http://www.uniprot.org/uniprot/O27795 O27795]
+
−
** [http://www.uniprot.org/uniprot/O84065 O84065]
+
−
** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
+
−
** [http://www.uniprot.org/uniprot/P48527 P48527]
+
−
** [http://www.uniprot.org/uniprot/Q49900 Q49900]
+
−
** [http://www.uniprot.org/uniprot/P75122 P75122]
+
−
** [http://www.uniprot.org/uniprot/P73141 P73141]
+
−
** [http://www.uniprot.org/uniprot/P73144 P73144]
+
−
** [http://www.uniprot.org/uniprot/P95982 P95982]
+
−
** [http://www.uniprot.org/uniprot/P00952 P00952]
+
−
** [http://www.uniprot.org/uniprot/P04077 P04077]
+
−
** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
+
−
** [http://www.uniprot.org/uniprot/P12063 P12063]
+
−
** [http://www.uniprot.org/uniprot/P93363 P93363]
+
−
** [http://www.uniprot.org/uniprot/O14055 O14055]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=mitochondrial_tyrosyl-trna_synthetase}}
+
−
{{#set: common name=methionyl-trna}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-6.1.1.1}}
+
−
{{#set: gene associated=Tiso_gene_10378|Tiso_gene_12171|Tiso_gene_4175|Tiso_gene_4174}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 21:09, 21 March 2018

Gene Tiso_gene_10165

  • right end position:
    • 8281
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7216
  • centisome position:
    • 82.40265
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10165&oldid=46386"