Difference between revisions of "RIBOFLAVINSYNDEAM-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=trans-D2-cis-D9-montanoyl-ACPs trans-D2-cis-D9-montanoyl-ACPs] == * common name: ** a trans-del...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNDEAM-RXN RIBOFLAVINSYNDEAM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** rib...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=trans-D2-cis-D9-montanoyl-ACPs trans-D2-cis-D9-montanoyl-ACPs] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNDEAM-RXN RIBOFLAVINSYNDEAM-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a trans-delta2-cis-delta9-C28:2-[acp]
+
** riboflavin_biosynthesis_protein
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.4.26 EC-3.5.4.26]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN1G-285]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-602]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one[c] '''=>''' 1 ammonium[c] '''+''' 1 5-amino-6-(5-phospho-D-ribosylamino)uracil[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_1389]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a trans-delta2-cis-delta9-C28:2-[acp]}}
+
* RHEA:
−
{{#set: consumed by=RXN1G-285}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21868 21868]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03459 R03459]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=riboflavin_biosynthesis_protein}}
 +
{{#set: ec number=EC-3.5.4.26}}
 +
{{#set: gene associated=Tiso_gene_1389}}
 +
{{#set: in pathway=RIBOSYN2-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:09, 21 March 2018

Reaction RIBOFLAVINSYNDEAM-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • riboflavin_biosynthesis_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBOFLAVINSYNDEAM-RXN&oldid=46455"