Difference between revisions of "RXN0-4222"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADNtm ADNtm] == * direction: ** REVERSIBLE * common name: ** Equilibrative nucleoside transporter,...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4222 RXN0-4222] == * direction: ** LEFT-TO-RIGHT * common name: ** exosome_complex_exonuclease...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4222 RXN0-4222] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** exosome_complex_exonuclease |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[WATER]][c] '''+''' 1 [[CPD0-2351]][c] '''=>''' 1 [[Ribonucleoside-Monophosphates]][c] '''+''' 1 [[CPD0-2354]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] '''=>''' 1 a ribonucleoside 5'-monophosphate[c] '''+''' 1 a tRNA precursor with a 5' extension[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_11613]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | ** [[ | + | * Gene: [[Tiso_gene_11612]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479] | ||
| + | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| − | {{#set: direction= | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name= | + | {{#set: common name=exosome_complex_exonuclease}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-3.1.13.1}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=Tiso_gene_11613|Tiso_gene_11612}} |
| − | {{#set: reconstruction category= | + | {{#set: in pathway=PWY0-1479}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=annotation-in-silico_annotation}} |
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:10, 21 March 2018
Contents
Reaction RXN0-4222
- direction:
- LEFT-TO-RIGHT
- common name:
- exosome_complex_exonuclease
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 CPD0-2351[c] => 1 Ribonucleoside-Monophosphates[c] + 1 CPD0-2354[c]
- With common name(s):
- 1 H2O[c] + 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] => 1 a ribonucleoside 5'-monophosphate[c] + 1 a tRNA precursor with a 5' extension[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11613
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_11612
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
