Difference between revisions of "O-SUCCHOMOSERLYASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7630 CPD-7630] == * smiles: ** C3(=C(C2(OC1(=CC(=CC(=C1CC2O)O)O)))C=C(O)C(=C3)O) * inchi ke...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http:...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7630 CPD-7630] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] ==
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* smiles:
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* direction:
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** C3(=C(C2(OC1(=CC(=CC(=C1CC2O)O)O)))C=C(O)C(=C3)O)
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=PFTAWBLQPZVEMU-UKRRQHHQSA-N
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** [http://enzyme.expasy.org/EC/2.5.1.48 EC-2.5.1.48]
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* common name:
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** (-)-epicatechin
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* molecular weight:
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** 290.272   
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* Synonym(s):
 
* Synonym(s):
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** epicatechin
 
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** 2,3-cis-epicatechin
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-9725]]
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** 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[CYS]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[SUC]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 O-succinyl-L-homoserine[c] '''+''' 1 L-cysteine[c] '''<=>''' 1 H+[c] '''+''' 1 L-cystathionine[c] '''+''' 1 succinate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_3732]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMPK12020003
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72276 72276]
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* LIGAND-RXN:
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* HMDB : HMDB01871
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** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C09727 C09727]
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** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
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** [http://www.chemspider.com/Chemical-Structure.65230.html 65230]
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** [http://www.uniprot.org/uniprot/P38675 P38675]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P24601 P24601]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=90 90]
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** [http://www.uniprot.org/uniprot/P00935 P00935]
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* METABOLIGHTS : MTBLC90
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** [http://www.uniprot.org/uniprot/O04981 O04981]
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{{#set: smiles=C3(=C(C2(OC1(=CC(=CC(=C1CC2O)O)O)))C=C(O)C(=C3)O)}}
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** [http://www.uniprot.org/uniprot/O04982 O04982]
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{{#set: inchi key=InChIKey=PFTAWBLQPZVEMU-UKRRQHHQSA-N}}
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** [http://www.uniprot.org/uniprot/O81334 O81334]
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{{#set: common name=(-)-epicatechin}}
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** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
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{{#set: molecular weight=290.272    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=epicatechin|2,3-cis-epicatechin}}
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{{#set: ec number=EC-2.5.1.48}}
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{{#set: produced by=RXN-9725}}
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{{#set: gene associated=Tiso_gene_3732}}
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{{#set: in pathway=PWY-I9|HOMOSER-METSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:10, 21 March 2018

Reaction O-SUCCHOMOSERLYASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine): PWY-I9
    • 5 reactions found over 7 reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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