Difference between revisions of "RXN-14048"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_7123 == * left end position: ** 15293 * transcription direction: ** POSITIVE * right end position: ** 17661 * centisome position: ** 77.307...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_7123 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] ==
* left end position:
+
* direction:
** 15293
+
** LEFT-TO-RIGHT
* transcription direction:
+
** POSITIVE
+
* right end position:
+
** 17661
+
* centisome position:
+
** 77.307655   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[ATPASE-RXN]]
+
* With identifiers:
** in-silico_annotation
+
** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c]
***ec-number
+
* With common name(s):
** experimental_annotation
+
** 1 L-cystathionine[c] '''=>''' 1 (2Z)-2-aminobut-2-enoate[c] '''+''' 1 L-cysteine[c] '''+''' 1 H+[c]
***ec-number
+
 
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
== Genes associated with this reaction  ==
** in-silico_annotation
+
Genes have been associated with this reaction based on different elements listed below.
***ec-number
+
* Gene: [[Tiso_gene_3732]]
** experimental_annotation
+
** Source: [[orthology-esiliculosus]]
***ec-number
+
== Pathways  ==
* [[RXN-12195]]
+
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
** in-silico_annotation
+
** '''4''' reactions found over '''4''' reactions in the full pathway
***ec-number
+
* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
** experimental_annotation
+
** '''3''' reactions found over '''3''' reactions in the full pathway
***ec-number
+
== Reconstruction information  ==
* [[RXN-12196]]
+
* Category: [[orthology]]
** in-silico_annotation
+
** Source: [[orthology-esiliculosus]]
***ec-number
+
*** Tool: [[pantograph]]
** experimental_annotation
+
***ec-number
+
* [[RXN0-5462]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
== Pathways associated ==
+
* [[PWY-7210]]
+
* [[PWY-7198]]
+
* [[PWY-6545]]
+
* [[PWY-7184]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=15293}}
+
* RHEA:
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913]
{{#set: right end position=17661}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=77.307655    }}
+
{{#set: gene associated=Tiso_gene_3732}}
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-801}}
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:10, 21 March 2018

Reaction RXN-14048

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-cystathionine[c] => 1 (2Z)-2-aminobut-2-enoate[c] + 1 L-cysteine[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOCYSDEGR-PWY, L-cysteine biosynthesis III (from L-homocysteine): HOMOCYSDEGR-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-801, L-homocysteine and L-cysteine interconversion: PWY-801
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links