Difference between revisions of "RXN-17876"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE] == * smiles: ** C[N+](...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17876 RXN-17876] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE 3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17876 RXN-17876] ==
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* smiles:
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* direction:
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** C[N+](CCCC(C(C([O-])=O)[N+])O)(C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ZRJHLGYVUCPZNH-MQWKRIRWSA-O
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* common name:
 
* common name:
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** 3-hydroxy-N6,N6,N6-trimethyl-L-lysine
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** methionine_aminopeptidase
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* molecular weight:
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* ec number:
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** 205.276   
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** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
 
* Synonym(s):
 
* Synonym(s):
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** (5-amino-5-carboxy-4-hydroxy-pentyl)-trimethyl-ammonium
 
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** 3-hydroxy-N6,N6,N6-trimethyl-L-lysin-N6-ium
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-9896]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[L-methionyl-L-seryl-Protein]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-L-Serine]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H2O[c] '''+''' 1 an N-terminal-L-methionyl-L-seryl-[protein][c] '''=>''' 1 L-methionine[c] '''+''' 1 an N-terminal L-seryl-[protein][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5715]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4247]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01259 C01259]
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{{#set: common name=methionine_aminopeptidase}}
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* CHEBI:
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{{#set: ec number=EC-3.4.11.18}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57515 57515]
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{{#set: gene associated=Tiso_gene_5715|Tiso_gene_4247}}
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* METABOLIGHTS : MTBLC57515
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{{#set: in pathway=PWY-7800}}
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* PUBCHEM:
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{{#set: reconstruction category=annotation}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203146 25203146]
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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* HMDB : HMDB01422
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=C[N+](CCCC(C(C([O-])=O)[N+])O)(C)C}}
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{{#set: inchi key=InChIKey=ZRJHLGYVUCPZNH-MQWKRIRWSA-O}}
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{{#set: common name=3-hydroxy-N6,N6,N6-trimethyl-L-lysine}}
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{{#set: molecular weight=205.276    }}
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{{#set: common name=(5-amino-5-carboxy-4-hydroxy-pentyl)-trimethyl-ammonium|3-hydroxy-N6,N6,N6-trimethyl-L-lysin-N6-ium}}
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{{#set: consumed by=RXN-9896}}
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Latest revision as of 20:10, 21 March 2018

Reaction RXN-17876

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionine_aminopeptidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17876&oldid=46586"