Difference between revisions of "PRTRANS-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_15398 == * left end position: ** 12 * transcription direction: ** POSITIVE * right end position: ** 2892 * centisome position: ** 0.2382370...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRTRANS-RXN PRTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** anthranilate * ec number:...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_15398 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRTRANS-RXN PRTRANS-RXN] ==
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* left end position:
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* direction:
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** 12
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** anthranilate
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* right end position:
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* ec number:
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** 2892
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** [http://enzyme.expasy.org/EC/2.4.2.18 EC-2.4.2.18]
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* centisome position:
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** 0.23823704   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.1.3.46-RXN]]
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* With identifiers:
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** experimental_annotation
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** 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[ANTHRANILATE]][c] '''+''' 1 [[PRPP]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[creinhardtii]]
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** 1 N-(5-phosphoribosyl)-anthranilate[c] '''+''' 1 diphosphate[c] '''<=>''' 1 anthranilate[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c]
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* [[6-PHOSPHOFRUCTO-2-KINASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** experimental_annotation
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* Gene: [[Tiso_gene_15839]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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* [[F16BDEPHOS-RXN]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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** Source: [[orthology-athaliana]]
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***automated-name-match
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** Source: [[orthology-synechocystis]]
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== Pathways associated ==
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** Source: [[orthology-esiliculosus]]
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* [[P185-PWY]]
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** Source: [[orthology-creinhardtii]]
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* [[GLUCONEO-PWY]]
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== Pathways  ==
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* [[SUCSYN-PWY]]
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
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* [[GLYCOLYSIS]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[CALVIN-PWY]]
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== Reconstruction information  ==
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* [[PWY-5484]]
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* Category: [[orthology]]
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* [[PWY66-423]]
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** Source: [[orthology-athaliana]]
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* [[PWY66-399]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=12}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11768 11768]
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{{#set: right end position=2892}}
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* LIGAND-RXN:
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{{#set: centisome position=0.23823704    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01073 R01073]
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{{#set: reaction associated=3.1.3.46-RXN|6-PHOSPHOFRUCTO-2-KINASE-RXN|F16BDEPHOS-RXN}}
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* UNIPROT:
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{{#set: pathway associated=P185-PWY|GLUCONEO-PWY|SUCSYN-PWY|GLYCOLYSIS|CALVIN-PWY|PWY-5484|PWY66-423|PWY66-399}}
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** [http://www.uniprot.org/uniprot/P12320 P12320]
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** [http://www.uniprot.org/uniprot/P12321 P12321]
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** [http://www.uniprot.org/uniprot/P42392 P42392]
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** [http://www.uniprot.org/uniprot/P66995 P66995]
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** [http://www.uniprot.org/uniprot/P20574 P20574]
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** [http://www.uniprot.org/uniprot/P20575 P20575]
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** [http://www.uniprot.org/uniprot/Q08654 Q08654]
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** [http://www.uniprot.org/uniprot/P06559 P06559]
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** [http://www.uniprot.org/uniprot/P43858 P43858]
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** [http://www.uniprot.org/uniprot/P56737 P56737]
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** [http://www.uniprot.org/uniprot/P18261 P18261]
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** [http://www.uniprot.org/uniprot/P17170 P17170]
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** [http://www.uniprot.org/uniprot/P00906 P00906]
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** [http://www.uniprot.org/uniprot/P00905 P00905]
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** [http://www.uniprot.org/uniprot/P00904 P00904]
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** [http://www.uniprot.org/uniprot/P03947 P03947]
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** [http://www.uniprot.org/uniprot/P07285 P07285]
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** [http://www.uniprot.org/uniprot/P00500 P00500]
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** [http://www.uniprot.org/uniprot/P26924 P26924]
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** [http://www.uniprot.org/uniprot/P30525 P30525]
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** [http://www.uniprot.org/uniprot/Q02000 Q02000]
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** [http://www.uniprot.org/uniprot/P73617 P73617]
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** [http://www.uniprot.org/uniprot/O80558 O80558]
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** [http://www.uniprot.org/uniprot/O65279 O65279]
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** [http://www.uniprot.org/uniprot/Q9T0C8 Q9T0C8]
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** [http://www.uniprot.org/uniprot/O49435 O49435]
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** [http://www.uniprot.org/uniprot/Q43085 Q43085]
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** [http://www.uniprot.org/uniprot/O68608 O68608]
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** [http://www.uniprot.org/uniprot/Q9S592 Q9S592]
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** [http://www.uniprot.org/uniprot/Q9ZFA8 Q9ZFA8]
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** [http://www.uniprot.org/uniprot/P94326 P94326]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=anthranilate}}
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{{#set: ec number=EC-2.4.2.18}}
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{{#set: gene associated=Tiso_gene_15839}}
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{{#set: in pathway=TRPSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:11, 21 March 2018

Reaction PRTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • anthranilate
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PRTRANS-RXN&oldid=46642"