Difference between revisions of "Tiso gene 8091"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLLG oligosaccha...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8091 == * right end position: ** 10313 * transcription direction: ** POSITIVE * left end position: ** 7928 * centisome position: ** 75.2539...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] ==
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== Gene Tiso_gene_8091 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 10313
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* common name:
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* transcription direction:
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** xyloglucan XLLG oligosaccharide β-galactosidase
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** POSITIVE
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** glycoside_hydrolase
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* left end position:
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** polyprotein
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** 7928
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
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** 75.253914   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13398]]
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** 1 [[CPD-13378]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 XLLG xyloglucan oligosaccharide[c] '''+''' 2 H2O[c] '''=>''' 2 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
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* Reaction: [[RXN-7676]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-7677]]
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* [[Tiso_gene_12839]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_1398]]
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* [[PWY-5068]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17558]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=10313}}
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{{#set: common name=xyloglucan XLLG oligosaccharide β-galactosidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=glycoside_hydrolase}}
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{{#set: left end position=7928}}
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{{#set: common name=polyprotein}}
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{{#set: centisome position=75.253914    }}
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{{#set: ec number=EC-3.2.1.23}}
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{{#set: reaction associated=RXN-13398|RXN-7676|RXN-7677}}
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{{#set: gene associated=Tiso_gene_12839|Tiso_gene_1398|Tiso_gene_17558}}
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{{#set: pathway associated=PWY-5068}}
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{{#set: in pathway=PWY-6807}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:11, 21 March 2018

Gene Tiso_gene_8091

  • right end position:
    • 10313
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7928
  • centisome position:
    • 75.253914
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8091&oldid=40001"