Difference between revisions of "RXN-6550"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOSULFATE-SULFURTRANSFERASE-RXN THIOSULFATE-SULFURTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6550 RXN-6550] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOSULFATE-SULFURTRANSFERASE-RXN THIOSULFATE-SULFURTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6550 RXN-6550] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** sulfurtransferase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.8.1.1 EC-2.8.1.1]
+
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HCN]][c] '''+''' 1 [[S2O3]][c] '''=>''' 1 [[HSCN]][c] '''+''' 1 [[SO3]][c] '''+''' 2 [[PROTON]][c]
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-137]][c] '''=>''' 1 [[CPD-6224]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 hydrogen cyanide[c] '''+''' 1 thiosulfate[c] '''=>''' 1 thiocyanate[c] '''+''' 1 sulfite[c] '''+''' 2 H+[c]
+
** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A4[c] '''=>''' 1 gibberellin A34[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13465]]
+
* Gene: [[Tiso_gene_3330]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_12589]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5838]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5350]], thiosulfate disproportionation IV (rhodanese): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5350 PWY-5350]
+
* [[PWY-102]], gibberellin inactivation I (2β-hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-esiliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16881 16881]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01931 R01931]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06338 R06338]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P25324 P25324]
+
−
** [http://www.uniprot.org/uniprot/P52196 P52196]
+
−
** [http://www.uniprot.org/uniprot/Q16762 Q16762]
+
−
** [http://www.uniprot.org/uniprot/P00586 P00586]
+
−
** [http://www.uniprot.org/uniprot/P25325 P25325]
+
−
** [http://www.uniprot.org/uniprot/P24329 P24329]
+
−
** [http://www.uniprot.org/uniprot/P52197 P52197]
+
−
** [http://www.uniprot.org/uniprot/O64530 O64530]
+
−
** [http://www.uniprot.org/uniprot/O50573 O50573]
+
−
** [http://www.uniprot.org/uniprot/Q9M4F7 Q9M4F7]
+
−
** [http://www.uniprot.org/uniprot/Q9SCY8 Q9SCY8]
+
−
** [http://www.uniprot.org/uniprot/Q9S7Y9 Q9S7Y9]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=sulfurtransferase}}
+
{{#set: ec number=EC-1.14.11}}
−
{{#set: ec number=EC-2.8.1.1}}
+
{{#set: gene associated=Tiso_gene_3330}}
−
{{#set: gene associated=Tiso_gene_13465|Tiso_gene_12589|Tiso_gene_5838}}
+
{{#set: in pathway=PWY-102}}
−
{{#set: in pathway=PWY-5350}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:11, 21 March 2018

Reaction RXN-6550

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-102, gibberellin inactivation I (2β-hydroxylation): PWY-102
    • 4 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-6550&oldid=46675"