Difference between revisions of "Tiso gene 1610"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11832 RXN-11832] == * direction: ** LEFT-TO-RIGHT * common name: ** ump-cmp_kinase ** cytidylat...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1610 == * right end position: ** 22757 * transcription direction: ** POSITIVE * left end position: ** 33 * centisome position: ** 0.1441677...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11832 RXN-11832] ==
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== Gene Tiso_gene_1610 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 22757
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* common name:
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* transcription direction:
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** ump-cmp_kinase
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** POSITIVE
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** cytidylate_kinase
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* left end position:
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* ec number:
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** 33
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** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25]
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** 0.14416775   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[CMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CDP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 CMP[c] '''=>''' 1 ADP[c] '''+''' 1 CDP[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_2386]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_14116]]
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* Reaction: [[RXN0-5462]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_19734]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-7184]]
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** [[pantograph]]-[[athaliana]]
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* [[PWY-7198]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6545]]
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* [[Tiso_gene_9739]]
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* [[PWY-7210]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=22757}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11600 11600]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=33}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00512 R00512]
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{{#set: centisome position=0.14416775    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/O59845 O59845]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/Q29561 Q29561]
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** [http://www.uniprot.org/uniprot/P43892 P43892]
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** [http://www.uniprot.org/uniprot/Q58071 Q58071]
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** [http://www.uniprot.org/uniprot/Q9CEY1 Q9CEY1]
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** [http://www.uniprot.org/uniprot/P57064 P57064]
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** [http://www.uniprot.org/uniprot/P0A6I0 P0A6I0]
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** [http://www.uniprot.org/uniprot/P47572 P47572]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ump-cmp_kinase}}
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{{#set: common name=cytidylate_kinase}}
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{{#set: ec number=EC-2.7.4.14}}
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{{#set: ec number=EC-2.7.4.25}}
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{{#set: gene associated=Tiso_gene_2386|Tiso_gene_14116|Tiso_gene_19734|Tiso_gene_9739}}
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{{#set: in pathway=PWY-7205}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:11, 21 March 2018

Gene Tiso_gene_1610

  • right end position:
    • 22757
  • transcription direction:
    • POSITIVE
  • left end position:
    • 33
  • centisome position:
    • 0.14416775
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1610&oldid=46678"