Difference between revisions of "CPD-881"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4261 RXN0-4261] == * direction: ** LEFT-TO-RIGHT * common name: ** atp-dependent_dna_helicase...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-881 CPD-881] == * smiles: ** CC(C=CC1(=C(CCCC1(C)C)C))=CC=CC(=CC=O)C * common name: ** 11-c...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4261 RXN0-4261] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-881 CPD-881] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C=CC1(=C(CCCC1(C)C)C))=CC=CC(=CC=O)C
 
* common name:
 
* common name:
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** atp-dependent_dna_helicase
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** 11-cis-retinal
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** helicase
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* inchi key:
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** rep_helicase
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** InChIKey=NCYCYZXNIZJOKI-IOUUIBBYSA-N
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* molecular weight:
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** 284.441   
 
* Synonym(s):
 
* Synonym(s):
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** cis-retinal
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** 11-cis-vitamin A aldehyde
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** 11-cis-retinene
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RHODOPSINRT]]
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** 1 [[Supercoiled-Duplex-DNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Single-Stranded-DNAs]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a supercoiled duplex DNA[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''=>''' 1 a single stranded DNA[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3462]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13200]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14019]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14420]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14204]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5713]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7553]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14419]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7552]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_395]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_9320]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 564-87-4
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{{#set: common name=atp-dependent_dna_helicase}}
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* LIPID_MAPS : LMPR01090003
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{{#set: common name=helicase}}
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* PUBCHEM:
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{{#set: common name=rep_helicase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280490 5280490]
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{{#set: gene associated=Tiso_gene_3462|Tiso_gene_13200|Tiso_gene_14019|Tiso_gene_14420|Tiso_gene_14204|Tiso_gene_5713|Tiso_gene_7553|Tiso_gene_14419|Tiso_gene_7552|Tiso_gene_395|Tiso_gene_9320}}
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* HMDB : HMDB02152
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{{#set: in pathway=}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02110 C02110]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEMSPIDER:
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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** [http://www.chemspider.com/Chemical-Structure.4444130.html 4444130]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16066 16066]
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* METABOLIGHTS : MTBLC16066
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{{#set: smiles=CC(C=CC1(=C(CCCC1(C)C)C))=CC=CC(=CC=O)C}}
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{{#set: common name=11-cis-retinal}}
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{{#set: inchi key=InChIKey=NCYCYZXNIZJOKI-IOUUIBBYSA-N}}
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{{#set: molecular weight=284.441    }}
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{{#set: common name=cis-retinal|11-cis-vitamin A aldehyde|11-cis-retinene}}
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{{#set: consumed by=RHODOPSINRT}}

Latest revision as of 21:12, 21 March 2018

Metabolite CPD-881

  • smiles:
    • CC(C=CC1(=C(CCCC1(C)C)C))=CC=CC(=CC=O)C
  • common name:
    • 11-cis-retinal
  • inchi key:
    • InChIKey=NCYCYZXNIZJOKI-IOUUIBBYSA-N
  • molecular weight:
    • 284.441
  • Synonym(s):
    • cis-retinal
    • 11-cis-vitamin A aldehyde
    • 11-cis-retinene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 564-87-4
  • LIPID_MAPS : LMPR01090003
  • PUBCHEM:
  • HMDB : HMDB02152
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC16066




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