Difference between revisions of "RXN-600"

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(Created page with "Category:Gene == Gene Tiso_gene_14842 == * left end position: ** 40 * transcription direction: ** POSITIVE * right end position: ** 1546 * centisome position: ** 0.7414272...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroflavonol-4-reductase * e...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_14842 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] ==
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* left end position:
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* direction:
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** 40
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** dihydroflavonol-4-reductase
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* right end position:
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* ec number:
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** 1546
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** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
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* centisome position:
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** 0.74142724   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GLUTAMINESYN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-474]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-590]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 2 H+[c] '''+''' 1 NADPH[c] '''+''' 1 (+)-taxifolin[c] '''=>''' 1 NADP+[c] '''+''' 1 (2R,3S,4S)-leucocyanidin[c]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[athaliana]]
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* Gene: [[Tiso_gene_15272]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* Gene: [[Tiso_gene_11016]]
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* [[GLNSYN-PWY]]
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** Source: [[orthology-athaliana]]
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* [[PWY-5675]]
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* Gene: [[Tiso_gene_9503]]
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* [[PWY-381]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6549]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-6964]]
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* Gene: [[Tiso_gene_9504]]
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* [[PWY490-3]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6963]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=40}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03636 R03636]
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{{#set: right end position=1546}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=0.74142724    }}
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{{#set: common name=dihydroflavonol-4-reductase}}
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{{#set: reaction associated=GLUTAMINESYN-RXN}}
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{{#set: ec number=EC-1.1.1.219}}
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{{#set: pathway associated=GLNSYN-PWY|PWY-5675|PWY-381|PWY-6549|PWY-6964|PWY490-3|PWY-6963}}
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{{#set: gene associated=Tiso_gene_15272|Tiso_gene_11016|Tiso_gene_9503|Tiso_gene_9504}}
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{{#set: in pathway=PWY1F-823}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:12, 21 March 2018

Reaction RXN-600

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydroflavonol-4-reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H+[c] + 1 NADPH[c] + 1 (+)-taxifolin[c] => 1 NADP+[c] + 1 (2R,3S,4S)-leucocyanidin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-823, leucopelargonidin and leucocyanidin biosynthesis: PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-600&oldid=46808"