Difference between revisions of "CPD-4125"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-phosphatidylinosito...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4125 CPD-4125] == * smiles: ** CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(CC(O)CCC(C)1[CH]2...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4125 CPD-4125] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(CC(O)CCC(C)1[CH]2CCC(C)34))))
 
* common name:
 
* common name:
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** 1-phosphatidylinositol-4-phosphate_5-kinase
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** avenasterol
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** ORF
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* inchi key:
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** phosphatidylinositol-4-phosphate_5-kinase
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** InChIKey=MCWVPSBQQXUCTB-OQTIOYDCSA-N
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** phosphatidylinositol4phosphate5kinase
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* molecular weight:
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* ec number:
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** 412.698   
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** [http://enzyme.expasy.org/EC/2.7.1.68 EC-2.7.1.68]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-4209]]
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** 1 [[ATP]][c] '''+''' 1 [[CPD-1108]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9590]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_14055]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_14966]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2021]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_7487]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15721]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_1131]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2008]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_18887]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17887]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_9249]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_730]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2350]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_15722]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17532]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_11381]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14425 14425]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=12795736 12795736]
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* LIGAND-RXN:
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* HMDB : HMDB06851
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** [http://www.genome.jp/dbget-bin/www_bget?R03469 R03469]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C15782 C15782]
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** [http://www.uniprot.org/uniprot/P48426 P48426]
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{{#set: smiles=CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(CC(O)CCC(C)1[CH]2CCC(C)34))))}}
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** [http://www.uniprot.org/uniprot/Q56YP2 Q56YP2]
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{{#set: common name=avenasterol}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: inchi key=InChIKey=MCWVPSBQQXUCTB-OQTIOYDCSA-N}}
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{{#set: common name=1-phosphatidylinositol-4-phosphate_5-kinase}}
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{{#set: molecular weight=412.698    }}
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{{#set: common name=ORF}}
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{{#set: consumed by=RXN-4209}}
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{{#set: common name=phosphatidylinositol-4-phosphate_5-kinase}}
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{{#set: common name=phosphatidylinositol4phosphate5kinase}}
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{{#set: ec number=EC-2.7.1.68}}
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{{#set: gene associated=Tiso_gene_9590|Tiso_gene_14055|Tiso_gene_14966|Tiso_gene_2021|Tiso_gene_7487|Tiso_gene_15721|Tiso_gene_1131|Tiso_gene_2008|Tiso_gene_18887|Tiso_gene_17887|Tiso_gene_9249|Tiso_gene_730|Tiso_gene_2350|Tiso_gene_15722|Tiso_gene_17532|Tiso_gene_11381}}
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{{#set: in pathway=PWY-6352|PWY-6351}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:11, 21 March 2018

Metabolite CPD-4125

  • smiles:
    • CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(CC(O)CCC(C)1[CH]2CCC(C)34))))
  • common name:
    • avenasterol
  • inchi key:
    • InChIKey=MCWVPSBQQXUCTB-OQTIOYDCSA-N
  • molecular weight:
    • 412.698
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC=C(C(C)C)CCC(C)[CH]3(CC[CH]4(C2(=CC[CH]1(CC(O)CCC(C)1[CH]2CCC(C)34))))" cannot be used as a page name in this wiki.



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