Difference between revisions of "HDS"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HDS HDS] == * direction: ** REVERSIBLE * common name: ** 4-hydroxy-3-methylbut-2-en-1-yl diphosphat...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HDS HDS] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
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** 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-14424]][c] '''=>''' 1 [[CPD-14425]][c] '''+''' 1 [[WATER]][c]
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** 1.0 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][h] '''+''' 1.0 [[Protein-Dithiols]][h] '''<=>''' 1.0 [[Protein-Disulfides]][h] '''+''' 1.0 [[PROTON]][h] '''+''' 1.0 [[WATER]][h] '''+''' 1.0 [[HYDROXY-METHYL-BUTENYL-DIP]][h]
 
* With common name(s):
 
* With common name(s):
** 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''=>''' 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c] '''+''' 1 H2O[c]
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** 1.0 2-C-methyl-D-erythritol-2,4-cyclodiphosphate[h] '''+''' 1.0 a protein dithiol[h] '''<=>''' 1.0 a protein disulfide[h] '''+''' 1.0 H+[h] '''+''' 1.0 H2O[h] '''+''' 1.0 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[h]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_15758]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 
** '''14''' reactions found over '''14''' reactions in the full pathway
 
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
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* Category: [[orthology]]
** [[pathwaytools]]:
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** Source: [[orthology-creinhardtii]]
*** [[experimental_annotation]]
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*** Tool: [[pantograph]]
*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: direction=REVERSIBLE}}
{{#set: ec number=EC-4.2.1.134}}
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{{#set: common name=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase}}
{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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{{#set: gene associated=Tiso_gene_15758}}
{{#set: reconstruction category=annotation}}
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{{#set: in pathway=}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:13, 21 March 2018

Reaction HDS

  • direction:
    • REVERSIBLE
  • common name:
    • 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links