Difference between revisions of "Tiso gene 2897"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATE-SYNTHASE-RXN CHORISMATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2897 == * Synonym(s): == Reactions associated == * Reaction: ADENOSINETRIPHOSPHATASE-RXN ** Source: orthology-esiliculosus * React...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATE-SYNTHASE-RXN CHORISMATE-SYNTHASE-RXN] ==
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== Gene Tiso_gene_2897 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** chorismate_synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.3.5 EC-4.2.3.5]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENOSINETRIPHOSPHATASE-RXN]]
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** 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c] '''=>''' 1 [[CHORISMATE]][c] '''+''' 1 [[Pi]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[ATPASE-RXN]]
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** 1 5-enolpyruvoyl-shikimate 3-phosphate[c] '''=>''' 1 chorismate[c] '''+''' 1 phosphate[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_9630]]
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* Reaction: [[RXN-12195]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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* Reaction: [[RXN0-5462]]
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** [[pantograph]]-[[athaliana]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways associated ==
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7184]]
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY-7198]]
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== Pathways  ==
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* [[PWY-6545]]
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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* [[PWY-7210]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21020 21020]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01714 R01714]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P27793 P27793]
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** [http://www.uniprot.org/uniprot/P23353 P23353]
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** [http://www.uniprot.org/uniprot/Q9JT81 Q9JT81]
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** [http://www.uniprot.org/uniprot/Q58575 Q58575]
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** [http://www.uniprot.org/uniprot/P43875 P43875]
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** [http://www.uniprot.org/uniprot/Q9PM41 Q9PM41]
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** [http://www.uniprot.org/uniprot/Q9CET2 Q9CET2]
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** [http://www.uniprot.org/uniprot/P28777 P28777]
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** [http://www.uniprot.org/uniprot/Q42885 Q42885]
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** [http://www.uniprot.org/uniprot/Q42884 Q42884]
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** [http://www.uniprot.org/uniprot/P16280 P16280]
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** [http://www.uniprot.org/uniprot/P12008 P12008]
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** [http://www.uniprot.org/uniprot/O74413 O74413]
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** [http://www.uniprot.org/uniprot/Q12640 Q12640]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=chorismate_synthase}}
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{{#set: ec number=EC-4.2.3.5}}
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{{#set: gene associated=Tiso_gene_9630}}
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{{#set: in pathway=PWY-6163}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:13, 21 March 2018

Gene Tiso_gene_2897

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2897&oldid=46887"