Difference between revisions of "RXN-10708"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.16.4-RXN 3.4.16.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-lactamase * ec n...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10708 RXN-10708] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_thioesteras...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.16.4-RXN 3.4.16.4-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10708 RXN-10708] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** beta-lactamase
+
** acyl-coenzyme_a_thioesterase_mitochondrial-like
 +
** thioesterase_superfamily_member_2
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
+
** [http://enzyme.expasy.org/EC/3.1.2.20 EC-3.1.2.20]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAcMur-Peptide-NAcGlc-Undecaprenols]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-ALANINE]][c] '''+''' 1 [[NAcMur-4Peptide-NAcGlc-Undecaprenols]][c]
+
** 1 [[CPD-11529]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-731]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a lipid II[c] '''+''' 1 H2O[c] '''=>''' 1 D-alanine[c] '''+''' 1 a N-acetylglucosamine--N-acetylmuramyl-(tetrapeptide) pyrophosphoryl-undecaprenol[c]
+
** 1 jasmonoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 (+)-7-iso-jasmonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18870]]
+
* Gene: [[Tiso_gene_10984]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_801]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_7477]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_800]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 +
** '''15''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P24228 P24228]
 
−
** [http://www.uniprot.org/uniprot/P38422 P38422]
 
−
** [http://www.uniprot.org/uniprot/Q9JUX6 Q9JUX6]
 
−
** [http://www.uniprot.org/uniprot/P08506 P08506]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7N2 Q9Z7N2]
 
−
** [http://www.uniprot.org/uniprot/P44466 P44466]
 
−
** [http://www.uniprot.org/uniprot/Q53613 Q53613]
 
−
** [http://www.uniprot.org/uniprot/Q05523 Q05523]
 
−
** [http://www.uniprot.org/uniprot/P39042 P39042]
 
−
** [http://www.uniprot.org/uniprot/Q59439 Q59439]
 
−
** [http://www.uniprot.org/uniprot/P35150 P35150]
 
−
** [http://www.uniprot.org/uniprot/P15555 P15555]
 
−
** [http://www.uniprot.org/uniprot/P08750 P08750]
 
−
** [http://www.uniprot.org/uniprot/P0AEB2 P0AEB2]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=beta-lactamase}}
+
{{#set: common name=acyl-coenzyme_a_thioesterase_mitochondrial-like}}
−
{{#set: ec number=EC-3.4.16.4}}
+
{{#set: common name=thioesterase_superfamily_member_2}}
−
{{#set: gene associated=Tiso_gene_18870}}
+
{{#set: common name=ORF}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-3.1.2.20}}
 +
{{#set: gene associated=Tiso_gene_10984|Tiso_gene_801|Tiso_gene_7477|Tiso_gene_800}}
 +
{{#set: in pathway=PWY-735}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:13, 21 March 2018

Reaction RXN-10708

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_thioesterase_mitochondrial-like
    • thioesterase_superfamily_member_2
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 jasmonoyl-CoA[c] + 1 H2O[c] => 1 H+[c] + 1 coenzyme A[c] + 1 (+)-7-iso-jasmonate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10708&oldid=46897"