Difference between revisions of "Tiso gene 475"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROPRIBTRANS-RXN OROPRIBTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** orotate_phosphor...")
 
(Created page with "Category:Gene == Gene Tiso_gene_475 == * right end position: ** 30897 * transcription direction: ** NEGATIVE * left end position: ** 28848 * centisome position: ** 87.6465...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROPRIBTRANS-RXN OROPRIBTRANS-RXN] ==
+
== Gene Tiso_gene_475 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 30897
−
* common name:
+
* transcription direction:
−
** orotate_phosphoribosyltransferase
+
** NEGATIVE
−
** trna_(cytosine_-c_)-methyltransferase
+
* left end position:
−
* ec number:
+
** 28848
−
** [http://enzyme.expasy.org/EC/2.4.2.10 EC-2.4.2.10]
+
* centisome position:
 +
** 87.64659   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[1.6.4.4-RXN]]
−
** 1 [[PPI]][c] '''+''' 1 [[OROTIDINE-5-PHOSPHATE]][c] '''<=>''' 1 [[OROTATE]][c] '''+''' 1 [[PRPP]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 diphosphate[c] '''+''' 1 orotidine 5'-phosphate[c] '''<=>''' 1 orotate[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c]
+
* Reaction: [[5.3.4.1-RXN]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[DISULISOM-RXN]]
−
* [[Tiso_gene_11163]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
* Reaction: [[THIOREDOXIN-REDUCT-NADPH-RXN]]
−
* [[Tiso_gene_11164]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
== Pathways associated ==
−
* [[Tiso_gene_18647]]
+
* [[THIOREDOX-PWY]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
== Pathways  ==
+
−
* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
+
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=30897}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10380 10380]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=28848}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01870 R01870]
+
{{#set: centisome position=87.64659    }}
−
* UNIPROT:
+
{{#set: reaction associated=1.6.4.4-RXN|5.3.4.1-RXN|DISULISOM-RXN|THIOREDOXIN-REDUCT-NADPH-RXN}}
−
** [http://www.uniprot.org/uniprot/P08309 P08309]
+
{{#set: pathway associated=THIOREDOX-PWY}}
−
** [http://www.uniprot.org/uniprot/P11172 P11172]
+
−
** [http://www.uniprot.org/uniprot/P18132 P18132]
+
−
** [http://www.uniprot.org/uniprot/P77889 P77889]
+
−
** [http://www.uniprot.org/uniprot/P0A5U0 P0A5U0]
+
−
** [http://www.uniprot.org/uniprot/Q9PIR1 Q9PIR1]
+
−
** [http://www.uniprot.org/uniprot/O67742 O67742]
+
−
** [http://www.uniprot.org/uniprot/O58855 O58855]
+
−
** [http://www.uniprot.org/uniprot/Q9Z7U6 Q9Z7U6]
+
−
** [http://www.uniprot.org/uniprot/Q9Y9D8 Q9Y9D8]
+
−
** [http://www.uniprot.org/uniprot/P56814 P56814]
+
−
** [http://www.uniprot.org/uniprot/Q58509 Q58509]
+
−
** [http://www.uniprot.org/uniprot/O28533 O28533]
+
−
** [http://www.uniprot.org/uniprot/Q9CGM8 Q9CGM8]
+
−
** [http://www.uniprot.org/uniprot/P25972 P25972]
+
−
** [http://www.uniprot.org/uniprot/O27888 O27888]
+
−
** [http://www.uniprot.org/uniprot/P65915 P65915]
+
−
** [http://www.uniprot.org/uniprot/P46534 P46534]
+
−
** [http://www.uniprot.org/uniprot/P43855 P43855]
+
−
** [http://www.uniprot.org/uniprot/P31754 P31754]
+
−
** [http://www.uniprot.org/uniprot/P18904 P18904]
+
−
** [http://www.uniprot.org/uniprot/Q01637 Q01637]
+
−
** [http://www.uniprot.org/uniprot/P09556 P09556]
+
−
** [http://www.uniprot.org/uniprot/P21846 P21846]
+
−
** [http://www.uniprot.org/uniprot/P35788 P35788]
+
−
** [http://www.uniprot.org/uniprot/P08870 P08870]
+
−
** [http://www.uniprot.org/uniprot/Q18516 Q18516]
+
−
** [http://www.uniprot.org/uniprot/Q45918 Q45918]
+
−
** [http://www.uniprot.org/uniprot/Q42586 Q42586]
+
−
** [http://www.uniprot.org/uniprot/P41923 P41923]
+
−
** [http://www.uniprot.org/uniprot/Q55574 Q55574]
+
−
** [http://www.uniprot.org/uniprot/Q42942 Q42942]
+
−
** [http://www.uniprot.org/uniprot/O76139 O76139]
+
−
** [http://www.uniprot.org/uniprot/O61790 O61790]
+
−
** [http://www.uniprot.org/uniprot/Q9X8R7 Q9X8R7]
+
−
** [http://www.uniprot.org/uniprot/O94331 O94331]
+
−
** [http://www.uniprot.org/uniprot/P30402 P30402]
+
−
** [http://www.uniprot.org/uniprot/P13298 P13298]
+
−
** [http://www.uniprot.org/uniprot/P0A7E3 P0A7E3]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=orotate_phosphoribosyltransferase}}
+
−
{{#set: common name=trna_(cytosine_-c_)-methyltransferase}}
+
−
{{#set: ec number=EC-2.4.2.10}}
+
−
{{#set: gene associated=Tiso_gene_11163|Tiso_gene_11164|Tiso_gene_18647}}
+
−
{{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:13, 21 March 2018

Gene Tiso_gene_475

  • right end position:
    • 30897
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 28848
  • centisome position:
    • 87.64659
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_475&oldid=46909"