Difference between revisions of "2.7.1.68-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_8159 == * left end position: ** 3776 * transcription direction: ** NEGATIVE * right end position: ** 11781 * centisome position: ** 29.9896...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-phosphatidylinosito...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_8159 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] ==
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* left end position:
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* direction:
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** 3776
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** 1-phosphatidylinositol-4-phosphate_5-kinase
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* right end position:
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** ORF
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** 11781
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** phosphatidylinositol-4-phosphate_5-kinase
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* centisome position:
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** phosphatidylinositol4phosphate5kinase
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** 29.989676   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.68 EC-2.7.1.68]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACID-PHOSPHATASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-1108]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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* [[RXN-5822]]
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** 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c] '''+''' 1 H+[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6348]]
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* Gene: [[Tiso_gene_2021]]
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* [[PWY-5083]]
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** Source: [[orthology-athaliana]]
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* [[NADPHOS-DEPHOS-PWY]]
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* Gene: [[Tiso_gene_17532]]
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* [[NAD-BIOSYNTHESIS-II]]
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** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_1131]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15721]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_14966]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_2350]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_11381]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15722]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_14055]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_17887]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_9590]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_2008]]
 +
** Source: [[orthology-athaliana]]
 +
* Gene: [[Tiso_gene_730]]
 +
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_9249]]
 +
** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_18887]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_7487]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3776}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14425 14425]
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{{#set: right end position=11781}}
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* LIGAND-RXN:
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{{#set: centisome position=29.989676    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03469 R03469]
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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** [http://www.uniprot.org/uniprot/P48426 P48426]
 +
** [http://www.uniprot.org/uniprot/Q56YP2 Q56YP2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=1-phosphatidylinositol-4-phosphate_5-kinase}}
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{{#set: common name=ORF}}
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{{#set: common name=phosphatidylinositol-4-phosphate_5-kinase}}
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{{#set: common name=phosphatidylinositol4phosphate5kinase}}
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{{#set: ec number=EC-2.7.1.68}}
 +
{{#set: gene associated=Tiso_gene_2021|Tiso_gene_17532|Tiso_gene_1131|Tiso_gene_15721|Tiso_gene_14966|Tiso_gene_2350|Tiso_gene_11381|Tiso_gene_15722|Tiso_gene_14055|Tiso_gene_17887|Tiso_gene_9590|Tiso_gene_2008|Tiso_gene_730|Tiso_gene_9249|Tiso_gene_18887|Tiso_gene_7487}}
 +
{{#set: in pathway=PWY-6352|PWY-6351}}
 +
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:11, 21 March 2018

Reaction 2.7.1.68-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1-phosphatidylinositol-4-phosphate_5-kinase
    • ORF
    • phosphatidylinositol-4-phosphate_5-kinase
    • phosphatidylinositol4phosphate5kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6352, 3-phosphoinositide biosynthesis: PWY-6352
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis: PWY-6351
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






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