Difference between revisions of "Tiso gene 1537"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.7-RXN 2.6.1.7-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1537 == * right end position: ** 1729 * transcription direction: ** POSITIVE * left end position: ** 149 * centisome position: ** 0.6363442...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.7-RXN 2.6.1.7-RXN] ==
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== Gene Tiso_gene_1537 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 1729
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.6.1.7 EC-2.6.1.7]
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** POSITIVE
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* left end position:
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** 149
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* centisome position:
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** 0.6363442   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 1 [[CPD-14736]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[CPD-476]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 L-kynurenine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 4-(2-aminophenyl)-2,4-dioxobutanoate[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: automated-name-match
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* [[Tiso_gene_15680]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
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*** Assignment: automated-name-match
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** '''9''' reactions found over '''17''' reactions in the full pathway
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* Reaction: [[RXN-10711]]
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* [[orthology]]:
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** Assignment: automated-name-match
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*** [[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-10767]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-12252]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-12575]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXNQT-4366]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1729}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20964 20964]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=149}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01956 R01956]
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{{#set: centisome position=0.6363442    }}
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* UNIPROT:
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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** [http://www.uniprot.org/uniprot/Q16773 Q16773]
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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** [http://www.uniprot.org/uniprot/P47039 P47039]
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** [http://www.uniprot.org/uniprot/Q08415 Q08415]
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** [http://www.uniprot.org/uniprot/Q9XX97 Q9XX97]
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** [http://www.uniprot.org/uniprot/Q8MP09 Q8MP09]
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** [http://www.uniprot.org/uniprot/O14209 O14209]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.6.1.7}}
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{{#set: gene associated=Tiso_gene_15680}}
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{{#set: in pathway=PWY-6309}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 20:13, 21 March 2018

Gene Tiso_gene_1537

  • right end position:
    • 1729
  • transcription direction:
    • POSITIVE
  • left end position:
    • 149
  • centisome position:
    • 0.6363442
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1537&oldid=46973"