Difference between revisions of "URIDINEKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYADENYLATE-KINASE-RXN DEOXYADENYLATE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** uridine_kinase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYADENYLATE-KINASE-RXN DEOXYADENYLATE-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** uridine_kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
+
** [http://enzyme.expasy.org/EC/2.7.1.48 EC-2.7.1.48]
−
** [http://enzyme.expasy.org/EC/2.7.4.11 EC-2.7.4.11]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[DAMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DADP]][c]
+
** 1 [[URIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 dAMP[c] '''=>''' 1 ADP[c] '''+''' 1 dADP[c]
+
** 1 uridine[c] '''+''' 1 ATP[c] '''=>''' 1 UMP[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5387]]
+
* Gene: [[Tiso_gene_14474]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_805]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_5837]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_12257]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_5839]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_19036]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_5388]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
+
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[synechocystis]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23100 23100]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16826 16826]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01547 R01547]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00964 R00964]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
 +
** [http://www.uniprot.org/uniprot/P47622 P47622]
 +
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
 +
** [http://www.uniprot.org/uniprot/P44533 P44533]
 +
** [http://www.uniprot.org/uniprot/P27515 P27515]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.7.4.13}}
+
{{#set: common name=uridine_kinase}}
−
{{#set: ec number=EC-2.7.4.11}}
+
{{#set: ec number=EC-2.7.1.48}}
−
{{#set: gene associated=Tiso_gene_5387|Tiso_gene_805|Tiso_gene_5837|Tiso_gene_12257|Tiso_gene_5839|Tiso_gene_19036|Tiso_gene_5388}}
+
{{#set: gene associated=Tiso_gene_14474}}
−
{{#set: in pathway=PWY-7224}}
+
{{#set: in pathway=PWY-7193}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:13, 21 March 2018

Reaction URIDINEKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • uridine_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 uridine[c] + 1 ATP[c] => 1 UMP[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7193, pyrimidine ribonucleosides salvage I: PWY-7193
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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