Difference between revisions of "RXN-9951"

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(Created page with "Category:Gene == Gene Tiso_gene_17751 == * left end position: ** 73 * transcription direction: ** NEGATIVE * right end position: ** 1283 * centisome position: ** 2.1007195...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9951 RXN-9951] == * direction: ** REVERSIBLE * common name: ** isocitrate dehydrogenase (NADP+)...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17751 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9951 RXN-9951] ==
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* left end position:
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* direction:
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** 73
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** isocitrate dehydrogenase (NADP+)
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* right end position:
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** ORF
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** 1283
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* centisome position:
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** 2.1007195   
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* Synonym(s):
 
* Synonym(s):
 +
** oxalosuccinate decarboxylase
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** oxalsuccinic decarboxylase
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** isocitrate (NADP) dehydrogenase
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** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
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** NADP-specific isocitrate dehydrogenase
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** NADP-linked isocitrate dehydrogenase
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** NADP isocitric dehydrogenase
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** isocitrate dehydrogenase (NADP-dependent)
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** NADP-dependent isocitric dehydrogenase
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** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
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** NADP+-linked isocitrate dehydrogenase
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** IDH (ambiguous)
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** dual-cofactor-specific isocitrate dehydrogenase
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** NADP+-ICDH
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** NADP+-IDH
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** IDP
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** IDP1
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** IDP2
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** IDP3
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADENOSINETRIPHOSPHATASE-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[THREO-DS-ISO-CITRATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
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* [[ATPASE-RXN]]
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* With common name(s):
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** in-silico_annotation
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** 1 D-threo-isocitrate[c] '''+''' 1 NADP+[c] '''<=>''' 1 oxalosuccinate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c]
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***ec-number
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* Gene: [[Tiso_gene_10809]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-12195]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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** Source: [[annotation-experimental_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_18262]]
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* [[RXN-12196]]
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** Source: [[annotation-experimental_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[RXN0-5462]]
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== Reconstruction information  ==
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** in-silico_annotation
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* Category: [[orthology]]
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***ec-number
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[annotation]]
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* [[PWY-7210]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-7198]]
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*** Tool: [[pathwaytools]]
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* [[PWY-6545]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7184]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=73}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25588 25588]
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{{#set: right end position=1283}}
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* LIGAND-RXN:
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{{#set: centisome position=2.1007195    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01899 R01899]
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: direction=REVERSIBLE}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
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{{#set: common name=isocitrate dehydrogenase (NADP+)}}
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{{#set: common name=ORF}}
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{{#set: common name=oxalosuccinate decarboxylase|oxalsuccinic decarboxylase|isocitrate (NADP) dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|NADP-specific isocitrate dehydrogenase|NADP-linked isocitrate dehydrogenase|NADP isocitric dehydrogenase|isocitrate dehydrogenase (NADP-dependent)|NADP-dependent isocitric dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|NADP+-linked isocitrate dehydrogenase|IDH (ambiguous)|dual-cofactor-specific isocitrate dehydrogenase|NADP+-ICDH|NADP+-IDH|IDP|IDP1|IDP2|IDP3}}
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{{#set: gene associated=Tiso_gene_10809|Tiso_gene_18262}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:14, 21 March 2018

Reaction RXN-9951

  • direction:
    • REVERSIBLE
  • common name:
    • isocitrate dehydrogenase (NADP+)
    • ORF
  • Synonym(s):
    • oxalosuccinate decarboxylase
    • oxalsuccinic decarboxylase
    • isocitrate (NADP) dehydrogenase
    • isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
    • NADP-specific isocitrate dehydrogenase
    • NADP-linked isocitrate dehydrogenase
    • NADP isocitric dehydrogenase
    • isocitrate dehydrogenase (NADP-dependent)
    • NADP-dependent isocitric dehydrogenase
    • triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
    • NADP+-linked isocitrate dehydrogenase
    • IDH (ambiguous)
    • dual-cofactor-specific isocitrate dehydrogenase
    • NADP+-ICDH
    • NADP+-IDH
    • IDP
    • IDP1
    • IDP2
    • IDP3

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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