Difference between revisions of "RXN-16621"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] == * direction: ** LEF...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 3-oxoacyl-synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.2.9 EC-3.2.2.9]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-564]][c]
+
** 1 [[5Z-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H2O[c] '''=>''' 1 adenine[c] '''+''' 1 S-ribosyl-L-homocysteine[c]
+
** 1 a (5Z)-tetradec-5-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a (7Z)-3-oxo-hexadec-7-enoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14191]]
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* Gene: [[Tiso_gene_5939]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154]
+
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''10''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6153]], autoinducer AI-2 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6153 PWY-6153]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17805 17805]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00194 R00194]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JV64 Q9JV64]
 
−
** [http://www.uniprot.org/uniprot/Q9PJ10 Q9PJ10]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.2.2.9}}
+
{{#set: common name=3-oxoacyl-synthase}}
−
{{#set: gene associated=Tiso_gene_14191}}
+
{{#set: ec number=EC-2.3.1.41}}
−
{{#set: in pathway=PWY-6154|PWY-6151|PWY-6153|PWY-I9}}
+
{{#set: gene associated=Tiso_gene_5939}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-7664}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:15, 21 March 2018

Reaction RXN-16621

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16621&oldid=47171"