Difference between revisions of "Tiso gene 20481"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHINE-OXIDASE-RXN XANTHINE-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
 
(Created page with "Category:Gene == Gene Tiso_gene_20481 == * right end position: ** 1227 * transcription direction: ** POSITIVE * left end position: ** 48 * centisome position: ** 3.7647057...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHINE-OXIDASE-RXN XANTHINE-OXIDASE-RXN] ==
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== Gene Tiso_gene_20481 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1227
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.17.3.2 EC-1.17.3.2]
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** POSITIVE
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* left end position:
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** 48
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* centisome position:
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** 3.7647057   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-10604]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[XANTHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[URATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 oxygen[c] '''+''' 1 xanthine[c] '''+''' 1 H2O[c] '''=>''' 1 urate[c] '''+''' 1 hydrogen peroxide[c]
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* Reaction: [[RXN-12037]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[THYROXINE-DEIODINASE-RXN]]
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* [[Tiso_gene_11775]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** Assignment: ec-number
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999]
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* [[PWY-6261]]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6260]]
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* [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1227}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21132 21132]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=48}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02107 R02107]
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{{#set: centisome position=3.7647057    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-10604|RXN-12037|THYROXINE-DEIODINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P47989 P47989]
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{{#set: pathway associated=PWY-6261|PWY-6260}}
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** [http://www.uniprot.org/uniprot/Q00519 Q00519]
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** [http://www.uniprot.org/uniprot/Q62637 Q62637]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.17.3.2}}
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{{#set: gene associated=Tiso_gene_11775}}
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{{#set: in pathway=PWY-6999|PWY-6538}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana}}
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Latest revision as of 21:15, 21 March 2018

Gene Tiso_gene_20481

  • right end position:
    • 1227
  • transcription direction:
    • POSITIVE
  • left end position:
    • 48
  • centisome position:
    • 3.7647057
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_20481&oldid=47234"