Difference between revisions of "RXN-16063"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C5 C5] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16063 RXN-16063] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/3.1...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C5 C5] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16063 RXN-16063] ==
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* smiles:
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* direction:
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC([N+])C(=O)[O-])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(O)C(CO)O1))([O-])=O)C)C)C)C)C)C)C
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=PNWZQTONLRRPST-KLDRQJOASA-J
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** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
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* common name:
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** undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
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* molecular weight:
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** 1713.036   
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* Synonym(s):
 
* Synonym(s):
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** N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate-D-alanyl-D-alanine-diphosphoundecaprenol
 
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** a peptidoglycan with cleaved N-acetyl-glucosamine
 
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** lipid intermediate I
 
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** undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide
 
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** lipid I
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[PHOSNACMURPENTATRANS-RXN]]
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** 1 [[CPD-17312]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-10244]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 docosahexaenoyl-CoA[c] '''+''' 1 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 docosahexaenoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7477]]
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** Source: [[orthology-athaliana]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=REVERSIBLE}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=52940090 52940090]
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{{#set: ec number=EC-3.1.2.2}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_7477}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=61387 61387]
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{{#set: in pathway=}}
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* BIGG : uagmda
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{{#set: reconstruction category=orthology}}
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* LIGAND-CPD:
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{{#set: reconstruction source=orthology-athaliana}}
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** [http://www.genome.jp/dbget-bin/www_bget?C05897 C05897]
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC([N+])C(=O)[O-])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(O)C(CO)O1))([O-])=O)C)C)C)C)C)C)C}}
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{{#set: inchi key=InChIKey=PNWZQTONLRRPST-KLDRQJOASA-J}}
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{{#set: common name=undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-&gamma;-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine}}
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{{#set: molecular weight=1713.036    }}
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{{#set: common name=N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate-D-alanyl-D-alanine-diphosphoundecaprenol|a peptidoglycan with cleaved N-acetyl-glucosamine|lipid intermediate I|undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide|lipid I}}
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{{#set: produced by=PHOSNACMURPENTATRANS-RXN}}
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Latest revision as of 20:15, 21 March 2018

Reaction RXN-16063

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 docosahexaenoyl-CoA[c] + 1 H2O[c] <=> 1 H+[c] + 1 coenzyme A[c] + 1 docosahexaenoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16063&oldid=47271"