Difference between revisions of "RXN-16063"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C5 C5] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16063 RXN-16063] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/3.1...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C5 C5] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16063 RXN-16063] ==
−
* smiles:
+
* direction:
−
** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC([N+])C(=O)[O-])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(O)C(CO)O1))([O-])=O)C)C)C)C)C)C)C
+
** REVERSIBLE
−
* inchi key:
+
* ec number:
−
** InChIKey=PNWZQTONLRRPST-KLDRQJOASA-J
+
** [http://enzyme.expasy.org/EC/3.1.2.2 EC-3.1.2.2]
−
* common name:
+
−
** undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
+
−
* molecular weight:
+
−
** 1713.036   
+
 
* Synonym(s):
 
* Synonym(s):
−
** N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate-D-alanyl-D-alanine-diphosphoundecaprenol
 
−
** a peptidoglycan with cleaved N-acetyl-glucosamine
 
−
** lipid intermediate I
 
−
** undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide
 
−
** lipid I
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[PHOSNACMURPENTATRANS-RXN]]
+
** 1 [[CPD-17312]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-10244]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 docosahexaenoyl-CoA[c] '''+''' 1 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 docosahexaenoate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_7477]]
 +
** Source: [[orthology-athaliana]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
{{#set: direction=REVERSIBLE}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=52940090 52940090]
+
{{#set: ec number=EC-3.1.2.2}}
−
* CHEBI:
+
{{#set: gene associated=Tiso_gene_7477}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=61387 61387]
+
{{#set: in pathway=}}
−
* BIGG : uagmda
+
{{#set: reconstruction category=orthology}}
−
* LIGAND-CPD:
+
{{#set: reconstruction source=orthology-athaliana}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C05897 C05897]
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC([N+])C(=O)[O-])C(NC(C)C(=O)NC(C)C([O-])=O)=O)C(O)C(CO)O1))([O-])=O)C)C)C)C)C)C)C}}
+
−
{{#set: inchi key=InChIKey=PNWZQTONLRRPST-KLDRQJOASA-J}}
+
−
{{#set: common name=undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-&gamma;-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine}}
+
−
{{#set: molecular weight=1713.036    }}
+
−
{{#set: common name=N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate-D-alanyl-D-alanine-diphosphoundecaprenol|a peptidoglycan with cleaved N-acetyl-glucosamine|lipid intermediate I|undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide|lipid I}}
+
−
{{#set: produced by=PHOSNACMURPENTATRANS-RXN}}
+

Latest revision as of 21:15, 21 March 2018

Reaction RXN-16063

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 docosahexaenoyl-CoA[c] + 1 H2O[c] <=> 1 H+[c] + 1 coenzyme A[c] + 1 docosahexaenoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16063&oldid=47271"