Difference between revisions of "PWY490-3"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.23.1-RXN 3.4.23.1-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.23.1-RXN 3.4.23.1-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/3.4.23.1 EC-3.4.23.1]
+
** nitrate reduction VI (assimilatory)
 
* Synonym(s):
 
* Synonym(s):
 +
** nitrate assimilation
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''4''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[General-Protein-Substrates]][c] '''=>''' 1 [[Peptides-holder]][c]
+
* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 H2O[c] '''+''' 1 a protein[c] '''=>''' 1 a peptide[c]
+
*** [[Tiso_gene_7919]]
−
 
+
** 6 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_1894]]
+
*** [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-athaliana]]
−
* [[Tiso_gene_12450]]
+
*** [[orthology-synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[manual-primary_network]]
−
== Pathways  ==
+
* [[GLUTAMINESYN-RXN]]
−
== Reconstruction information  ==
+
** 4 associated gene(s):
−
* [[orthology]]:
+
*** [[Tiso_gene_14842]]
−
** [[pantograph]]:
+
*** [[Tiso_gene_13754]]
−
*** [[esiliculosus]]
+
*** [[Tiso_gene_13820]]
 +
*** [[Tiso_gene_6647]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[GLUTDEHYD-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_2581]]
 +
*** [[Tiso_gene_1154]]
 +
*** [[Tiso_gene_11511]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1.7.7.2-RXN 1.7.7.2-RXN]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-1117}}
−
** [http://www.uniprot.org/uniprot/Q7M319 Q7M319]
+
{{#set: common name=nitrate reduction VI (assimilatory)}}
−
** [http://www.uniprot.org/uniprot/P04073 P04073]
+
{{#set: common name=nitrate assimilation}}
−
** [http://www.uniprot.org/uniprot/P13636 P13636]
+
{{#set: reaction found=3}}
−
** [http://www.uniprot.org/uniprot/Q7LZP4 Q7LZP4]
+
{{#set: total reaction=4}}
−
** [http://www.uniprot.org/uniprot/Q7LZF2 Q7LZF2]
+
{{#set: completion rate=75.0}}
−
** [http://www.uniprot.org/uniprot/Q28158 Q28158]
+
−
** [http://www.uniprot.org/uniprot/Q28157 Q28157]
+
−
** [http://www.uniprot.org/uniprot/P00792 P00792]
+
−
** [http://www.uniprot.org/uniprot/Q9PRG9 Q9PRG9]
+
−
** [http://www.uniprot.org/uniprot/P00790 P00790]
+
−
** [http://www.uniprot.org/uniprot/P03954 P03954]
+
−
** [http://www.uniprot.org/uniprot/P11489 P11489]
+
−
** [http://www.uniprot.org/uniprot/P00791 P00791]
+
−
** [http://www.uniprot.org/uniprot/P27678 P27678]
+
−
** [http://www.uniprot.org/uniprot/P27677 P27677]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-3.4.23.1}}
+
−
{{#set: gene associated=Tiso_gene_1894|Tiso_gene_12450}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+

Latest revision as of 19:04, 21 March 2018

Pathway PWY490-3

  • taxonomic range:
  • common name:
    • nitrate reduction VI (assimilatory)
  • Synonym(s):
    • nitrate assimilation

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY490-3&oldid=39342"