Difference between revisions of "3.2.1.152-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] == * direction: ** LEFT-TO-RIGHT * common name: ** proline_dehydrogenase * ec...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.152-RXN 3.2.1.152-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** endo-_-beta-mannosi...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.152-RXN 3.2.1.152-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** proline_dehydrogenase
+
** endo-_-beta-mannosidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.5.5.2 EC-1.5.5.2]
+
** [http://enzyme.expasy.org/EC/3.2.1.152 EC-3.2.1.152]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETR-Quinones]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-7263]][c] '''=>''' 1 [[CPD-13935]][c] '''+''' 1 [[CPD-7265]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an electron-transfer quinone[c] '''+''' 1 L-proline[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 H+[c]
+
** 1 H2O[c] '''+''' 1 a α-D-mannosyl-(1->6)-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-β-D-glucosaminyl-[glycoprotein][c] '''=>''' 1 α1,6-D mannobiose[c] '''+''' 1 an N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-β-D-glucosaminyl-[glycoprotein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9762]]
+
* Gene: [[Tiso_gene_17158]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_5241]]
−
* [[Tiso_gene_18826]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_15472]]
−
* [[Tiso_gene_18825]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5737]], (5R)-carbapenem carboxylate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5737 PWY-5737]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01253 R01253]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P95629 P95629]
 
−
** [http://www.uniprot.org/uniprot/Q59206 Q59206]
 
−
** [http://www.uniprot.org/uniprot/P74275 P74275]
 
−
** [http://www.uniprot.org/uniprot/P10503 P10503]
 
−
** [http://www.uniprot.org/uniprot/Q51873 Q51873]
 
−
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
 
−
** [http://www.uniprot.org/uniprot/O24897 O24897]
 
−
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
 
−
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
 
−
** [http://www.uniprot.org/uniprot/P09546 P09546]
 
−
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
 
−
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
 
−
** [http://www.uniprot.org/uniprot/Q04499 Q04499]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=proline_dehydrogenase}}
+
{{#set: common name=endo-_-beta-mannosidase}}
−
{{#set: ec number=EC-1.5.5.2}}
+
{{#set: ec number=EC-3.2.1.152}}
−
{{#set: gene associated=Tiso_gene_9762|Tiso_gene_18826|Tiso_gene_18825}}
+
{{#set: gene associated=Tiso_gene_17158|Tiso_gene_5241|Tiso_gene_15472}}
−
{{#set: in pathway=PROUT-PWY|PWY-6922|PWY-5737|CITRULBIO-PWY}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:11, 21 March 2018

Reaction 3.2.1.152-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • endo-_-beta-mannosidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a α-D-mannosyl-(1->6)-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-β-D-glucosaminyl-[glycoprotein][c] => 1 α1,6-D mannobiose[c] + 1 an N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-β-D-glucosaminyl-[glycoprotein][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3.2.1.152-RXN&oldid=40085"