Difference between revisions of "MALIC-NADP-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COPROPORPHYRINOGEN_III COPROPORPHYRINOGEN_III] == * smiles: ** CC1(=C2(CC5(=C(C)C(CCC([O-])=O)=...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COPROPORPHYRINOGEN_III COPROPORPHYRINOGEN_III] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] ==
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* smiles:
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* direction:
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** CC1(=C2(CC5(=C(C)C(CCC([O-])=O)=C(CC4(=C(CCC([O-])=O)C(C)=C(CC3(=C(CCC(=O)[O-])C(C)=C(CC(=C(CCC([O-])=O)1)N2)N3))N4))N5)))
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=NIUVHXTXUXOFEB-UHFFFAOYSA-J
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** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
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* common name:
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** coproporphyrinogen III
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* molecular weight:
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** 656.734   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN0-1461]]
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* With identifiers:
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* [[HEMN-RXN]]
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** 1 [[NADP]][c] '''+''' 1 [[MAL]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADPH]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[UROGENDECARBOX-RXN]]
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** 1 NADP+[c] '''+''' 1 (S)-malate[c] '''=>''' 1 pyruvate[c] '''+''' 1 CO2[c] '''+''' 1 NADPH[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_12200]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6675]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_12896]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 2624-63-7
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* RHEA:
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* METABOLIGHTS : MTBLC57309
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18253 18253]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20849114 20849114]
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** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
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* HMDB : HMDB01261
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P12628 P12628]
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** [http://www.genome.jp/dbget-bin/www_bget?C03263 C03263]
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** [http://www.uniprot.org/uniprot/P06801 P06801]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P13697 P13697]
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** [http://www.chemspider.com/Chemical-Structure.20171552.html 20171552]
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** [http://www.uniprot.org/uniprot/P16243 P16243]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O48656 O48656]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57309 57309]
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** [http://www.uniprot.org/uniprot/P22178 P22178]
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* BIGG : cpppg3
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** [http://www.uniprot.org/uniprot/P93139 P93139]
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{{#set: smiles=CC1(=C2(CC5(=C(C)C(CCC([O-])=O)=C(CC4(=C(CCC([O-])=O)C(C)=C(CC3(=C(CCC(=O)[O-])C(C)=C(CC(=C(CCC([O-])=O)1)N2)N3))N4))N5)))}}
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** [http://www.uniprot.org/uniprot/P34105 P34105]
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{{#set: inchi key=InChIKey=NIUVHXTXUXOFEB-UHFFFAOYSA-J}}
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** [http://www.uniprot.org/uniprot/P28227 P28227]
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{{#set: common name=coproporphyrinogen III}}
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** [http://www.uniprot.org/uniprot/P36444 P36444]
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{{#set: molecular weight=656.734    }}
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** [http://www.uniprot.org/uniprot/P40927 P40927]
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{{#set: consumed by=RXN0-1461|HEMN-RXN}}
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** [http://www.uniprot.org/uniprot/P37223 P37223]
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{{#set: produced by=UROGENDECARBOX-RXN}}
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** [http://www.uniprot.org/uniprot/P48163 P48163]
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** [http://www.uniprot.org/uniprot/Q16798 Q16798]
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** [http://www.uniprot.org/uniprot/O50015 O50015]
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** [http://www.uniprot.org/uniprot/O04935 O04935]
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** [http://www.uniprot.org/uniprot/O04936 O04936]
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** [http://www.uniprot.org/uniprot/P37222 P37222]
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** [http://www.uniprot.org/uniprot/Q42888 Q42888]
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** [http://www.uniprot.org/uniprot/Q42889 Q42889]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.1.1.40}}
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{{#set: gene associated=Tiso_gene_12200|Tiso_gene_6675|Tiso_gene_12896}}
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{{#set: in pathway=PWY-241|GLUCONEO-PWY|PWY-7117}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:17, 21 March 2018

Reaction MALIC-NADP-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 (S)-malate[c] => 1 pyruvate[c] + 1 CO2[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
    • 2 reactions found over 5 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MALIC-NADP-RXN&oldid=47532"