Difference between revisions of "2.7.8.23-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.23-RXN 2.7.8.23-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.23-RXN 2.7.8.23-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** 3-oxo-octanoyl-[acyl-carrier protein] reductase
+
−
** polyketide_synthase
+
−
** 3-oxoacyl-(acyl-carrier-protein)
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/2.7.8.23 EC-2.7.8.23]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3-Hydroxy-octanoyl-ACPs]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[1-CARBOXYVINYL-CARBOXYPHOSPHONATE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-HYDROHYDROXYPHOSPHORYLPYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-octanoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxyoctanoyl-[acp][c]
+
** 1 H+[c] '''+''' 1 carboxyphosphonoenolpyruvate[c] '''<=>''' 1 CO2[c] '''+''' 1 phosphinopyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10876]]
+
* Gene: [[Tiso_gene_2241]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_13083]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_624]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_10415]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_9885]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16579]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[synechocystis]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] reductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14045 14045]
−
{{#set: common name=polyketide_synthase}}
+
* LIGAND-RXN:
−
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05165 R05165]
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: ec number=EC-2.7.8.23}}
−
{{#set: ec number=EC-1.1.1.100}}
+
{{#set: gene associated=Tiso_gene_2241}}
−
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_13083|Tiso_gene_624|Tiso_gene_10415|Tiso_gene_9885|Tiso_gene_16579|Tiso_gene_500|Tiso_gene_136|Tiso_gene_135|Tiso_gene_13394}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-5971|PWY-5994}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=synechocystis|esiliculosus}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction source=primary_network}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:17, 21 March 2018

Reaction 2.7.8.23-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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