Difference between revisions of "1.5.1.9-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-REDUCT-NADPH-RXN GLUTATHIONE-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** saccharopine_dehydrogen...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-REDUCT-NADPH-RXN GLUTATHIONE-REDUCT-NADPH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.9-RXN 1.5.1.9-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glutathione_reductase
+
** saccharopine_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.1.7 EC-1.8.1.7]
+
** [http://enzyme.expasy.org/EC/1.5.1.9 EC-1.5.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OXIDIZED-GLUTATHIONE]][c] '''=>''' 2 [[GLUTATHIONE]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[ALLYSINE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 glutathione disulfide[c] '''=>''' 2 glutathione[c] '''+''' 1 NADP+[c]
+
** 1 H2O[c] '''+''' 1 L-saccharopine[c] '''+''' 1 NAD+[c] '''=>''' 1 (S)-2-amino-6-oxohexanoate[c] '''+''' 1 NADH[c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2804]]
+
* Gene: [[Tiso_gene_7039]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_1156]]
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_10095]]
−
* [[Tiso_gene_12533]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_7038]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_9366]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_4160]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLUT-REDOX-PWY]], glutathione-glutaredoxin redox reactions: [http://metacyc.org/META/NEW-IMAGE?object=GLUT-REDOX-PWY GLUT-REDOX-PWY]
+
* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-4081]], glutathione-peroxide redox reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4081 PWY-4081]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
* [[manual]]:
+
*** Tool: [[pantograph]]
−
** [[primary_network]]
+
* Category: [[annotation]]
−
* [[annotation]]:
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pathwaytools]]:
+
*** Tool: [[pathwaytools]]
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11740 11740]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24520 24520]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00115 R00115]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02313 R02313]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P43783 P43783]
+
−
** [http://www.uniprot.org/uniprot/Q9CH92 Q9CH92]
+
−
** [http://www.uniprot.org/uniprot/P48639 P48639]
+
−
** [http://www.uniprot.org/uniprot/P11804 P11804]
+
−
** [http://www.uniprot.org/uniprot/P06715 P06715]
+
−
** [http://www.uniprot.org/uniprot/P23189 P23189]
+
−
** [http://www.uniprot.org/uniprot/P80461 P80461]
+
−
** [http://www.uniprot.org/uniprot/Q60151 Q60151]
+
−
** [http://www.uniprot.org/uniprot/P41921 P41921]
+
−
** [http://www.uniprot.org/uniprot/Q9TWE1 Q9TWE1]
+
−
** [http://www.uniprot.org/uniprot/O64409 O64409]
+
−
** [http://www.uniprot.org/uniprot/Q43621 Q43621]
+
−
** [http://www.uniprot.org/uniprot/P48640 P48640]
+
−
** [http://www.uniprot.org/uniprot/Q43154 Q43154]
+
−
** [http://www.uniprot.org/uniprot/Q93379 Q93379]
+
−
** [http://www.uniprot.org/uniprot/P78965 P78965]
+
−
** [http://www.uniprot.org/uniprot/P42770 P42770]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glutathione_reductase}}
+
{{#set: common name=saccharopine_dehydrogenase}}
−
{{#set: ec number=EC-1.8.1.7}}
+
{{#set: ec number=EC-1.5.1.9}}
−
{{#set: gene associated=Tiso_gene_2804|Tiso_gene_12533}}
+
{{#set: gene associated=Tiso_gene_7039|Tiso_gene_1156|Tiso_gene_10095|Tiso_gene_7038|Tiso_gene_9366|Tiso_gene_4160}}
−
{{#set: in pathway=GLUT-REDOX-PWY|PWY-4081}}
+
{{#set: in pathway=LYSINE-DEG1-PWY}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 21:18, 21 March 2018

Reaction 1.5.1.9-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • saccharopine_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-saccharopine[c] + 1 NAD+[c] => 1 (S)-2-amino-6-oxohexanoate[c] + 1 NADH[c] + 1 L-glutamate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=1.5.1.9-RXN&oldid=47656"