Difference between revisions of "CPD-9965"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12375 RXN-12375] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_(guanine_-n1)-methyltr...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9965 CPD-9965] == * smiles: ** CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12375 RXN-12375] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9965 CPD-9965] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
** trna_(guanine_-n1)-methyltransferase
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** icosanoyl-CoA
** probable_trna_(guanine_-n_)-dimethyltransferase_1
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* inchi key:
* ec number:
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** InChIKey=JYLSVNBJLYCSSW-IBYUJNRCSA-J
** [http://enzyme.expasy.org/EC/2.1.1.216 EC-2.1.1.216]
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* molecular weight:
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** 1058.022   
 
* Synonym(s):
 
* Synonym(s):
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** eicosanoyl-CoA
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** arachidoyl-CoA
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN-13295]]
** 1 [[Guanine26-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-Containing-N2-Methylguanine-26]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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* [[RXN-9629]]
* With common name(s):
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== Reaction(s) known to produce the compound ==
** 1 a guanine26 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 an N2-methylguanine26 in tRNA[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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* [[RXN-13306]]
 
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== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
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* [[RXN1G-460]]
Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9360]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16307]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829]
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** '''3''' reactions found over '''15''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
{{#set: common name=trna_(guanine_-n1)-methyltransferase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203411 25203411]
{{#set: common name=probable_trna_(guanine_-n_)-dimethyltransferase_1}}
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* HMDB : HMDB04258
{{#set: ec number=EC-2.1.1.216}}
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* CHEBI:
{{#set: gene associated=Tiso_gene_9360|Tiso_gene_16307}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57380 57380]
{{#set: in pathway=PWY-6829}}
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* LIGAND-CPD:
{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02041 C02041]
{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: common name=icosanoyl-CoA}}
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{{#set: inchi key=InChIKey=JYLSVNBJLYCSSW-IBYUJNRCSA-J}}
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{{#set: molecular weight=1058.022    }}
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{{#set: common name=eicosanoyl-CoA|arachidoyl-CoA}}
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{{#set: consumed by=RXN-13295|RXN-9629}}
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{{#set: produced by=RXN-13306}}
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{{#set: reversible reaction associated=RXN1G-460}}

Latest revision as of 20:18, 21 March 2018

Metabolite CPD-9965

  • smiles:
    • CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • icosanoyl-CoA
  • inchi key:
    • InChIKey=JYLSVNBJLYCSSW-IBYUJNRCSA-J
  • molecular weight:
    • 1058.022
  • Synonym(s):
    • eicosanoyl-CoA
    • arachidoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.