Difference between revisions of "RXN-17926"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17926 RXN-17926] == * direction: ** LEFT-TO-RIGHT * common name: ** gtp-binding_protein * Synon...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17926 RXN-17926] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/2.7.7.24 EC-2.7.7.24]
+
** gtp-binding_protein
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[TTP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLC-1-P]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[DTDP-D-GLUCOSE]][c]
+
** 1 [[5-Phospho-RNA]][c] '''+''' 1 [[RNA-Ligase-L-lysine-adenylate]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[RNA-Ligase-L-lysine]][c] '''+''' 1 [[A-5-prime-PP-5-prime-RNA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dTTP[c] '''+''' 1 H+[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''<=>''' 1 diphosphate[c] '''+''' 1 dTDP-&alpha;-D-glucose[c]
+
** 1 a 5'-phospho-ribonucleoside-[RNA][c] '''+''' 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] '''+''' 2 H+[c] '''=>''' 1 an [RNA ligase]-L-lysine[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-(ribonucleoside)-[RNA][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14704]]
+
* Gene: [[Tiso_gene_8397]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8396]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8398]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7315]], dTDP-N-acetylthomosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7316]], dTDP-N-acetylviosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7316 PWY-7316]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7301]], dTDP-4-O-demethyl-&beta;-L-noviose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7301 PWY-7301]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7814]], dTDP-L-daunosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7814 PWY-7814]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7312]], dTDP-D-&beta;-fucofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7318]], dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7318 PWY-7318]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6942]], dTDP-D-desosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6942 PWY-6942]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7104]], dTDP-L-megosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7104 PWY-7104]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6953]], dTDP-3-acetamido-&alpha;-D-fucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7440]], dTDP-&beta;-L-4-epi-vancosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7657]], dTDP-&beta;-L-digitoxose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6808]], dTDP-D-forosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7413]], dTDP-6-deoxy-&alpha;-D-allose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7413 PWY-7413]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6976]], dTDP-L-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6976 PWY-6976]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7688]], dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7688 PWY-7688]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6974]], dTDP-L-olivose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6974 PWY-6974]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6973]], dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6973 PWY-6973]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-3221]], dTDP-L-rhamnose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7414]], dTDP-&alpha;-D-mycaminose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7414 PWY-7414]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15225 15225]
+
{{#set: common name=gtp-binding_protein}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_8397|Tiso_gene_8396|Tiso_gene_8398}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02328 R02328]
+
{{#set: in pathway=}}
−
* UNIPROT:
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P55256 P55256]
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
** [http://www.uniprot.org/uniprot/O27819 O27819]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q58501 Q58501]
+
−
** [http://www.uniprot.org/uniprot/P37744 P37744]
+
−
** [http://www.uniprot.org/uniprot/P72017 P72017]
+
−
** [http://www.uniprot.org/uniprot/P61887 P61887]
+
−
** [http://www.uniprot.org/uniprot/P57040 P57040]
+
−
** [http://www.uniprot.org/uniprot/P26393 P26393]
+
−
** [http://www.uniprot.org/uniprot/P55254 P55254]
+
−
** [http://www.uniprot.org/uniprot/P55257 P55257]
+
−
** [http://www.uniprot.org/uniprot/P37779 P37779]
+
−
** [http://www.uniprot.org/uniprot/P37762 P37762]
+
−
** [http://www.uniprot.org/uniprot/Q54143 Q54143]
+
−
** [http://www.uniprot.org/uniprot/Q56174 Q56174]
+
−
** [http://www.uniprot.org/uniprot/Q51149 Q51149]
+
−
** [http://www.uniprot.org/uniprot/P55253 P55253]
+
−
** [http://www.uniprot.org/uniprot/O66250 O66250]
+
−
** [http://www.uniprot.org/uniprot/O08245 O08245]
+
−
** [http://www.uniprot.org/uniprot/Q9RR29 Q9RR29]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-2.7.7.24}}
+
−
{{#set: gene associated=Tiso_gene_14704}}
+
−
{{#set: in pathway=PWY-7315|PWY-7316|PWY-7301|PWY-7814|DTDPRHAMSYN-PWY|PWY-7312|PWY-7318|PWY-6942|PWY-7104|PWY-6953|PWY-7440|PWY-7657|PWY-6808|PWY-7413|PWY-6976|PWY-7688|PWY-6974|PWY-6973|PWY-3221|PWY-7414}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis}}
+

Latest revision as of 21:18, 21 March 2018

Reaction RXN-17926

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • gtp-binding_protein
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17926&oldid=47691"