Difference between revisions of "2.7.8.11-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_7919 == * left end position: ** 299 * transcription direction: ** NEGATIVE * right end position: ** 3112 * centisome position: ** 1.5643803...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.11-RXN 2.7.8.11-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_7919 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.11-RXN 2.7.8.11-RXN] ==
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* left end position:
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* direction:
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** 299
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/2.7.8.11 EC-2.7.8.11]
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* right end position:
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** 3112
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* centisome position:
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** 1.5643803   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[MYO-INOSITOL]][c] '''=>''' 1 [[L-1-phosphatidyl-inositols]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 a CDP-diacylglycerol[c] '''+''' 1 myo-inositol[c] '''=>''' 1 an L-1-phosphatidyl-inositol[c] '''+''' 1 CMP[c] '''+''' 1 H+[c]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[synechocystis]]
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* Gene: [[Tiso_gene_6541]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-381]]
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* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
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* [[PWY490-3]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7625]], phosphatidylinositol biosynthesis II (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7625 PWY-7625]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY]
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** '''8''' reactions found over '''23''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=299}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11580 11580]
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{{#set: right end position=3112}}
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* LIGAND-RXN:
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{{#set: centisome position=1.5643803    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01802 R01802]
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{{#set: reaction associated=FERREDOXIN--NITRITE-REDUCTASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-381|PWY490-3}}
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** [http://www.uniprot.org/uniprot/P06197 P06197]
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** [http://www.uniprot.org/uniprot/P70500 P70500]
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** [http://www.uniprot.org/uniprot/Q8LBA6 Q8LBA6]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.7.8.11}}
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{{#set: gene associated=Tiso_gene_6541}}
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{{#set: in pathway=PWY-6352|PWY-6351|PWY-7625|PHOSLIPSYN2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:19, 21 March 2018

Reaction 2.7.8.11-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6352, 3-phosphoinositide biosynthesis: PWY-6352
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis: PWY-6351
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7625, phosphatidylinositol biosynthesis II (eukaryotes): PWY-7625
    • 1 reactions found over 1 reactions in the full pathway
  • PHOSLIPSYN2-PWY, superpathway of phospholipid biosynthesis II (plants): PHOSLIPSYN2-PWY
    • 8 reactions found over 23 reactions in the full pathway

Reconstruction information

External links




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