Difference between revisions of "Tiso gene 19047"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4142 RXNQT-4142] == * direction: ** LEFT-TO-RIGHT * common name: ** possible_l-galactose-1-ph...")
 
(Created page with "Category:Gene == Gene Tiso_gene_19047 == * right end position: ** 2559 * transcription direction: ** POSITIVE * left end position: ** 1 * centisome position: ** 3.80372760...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4142 RXNQT-4142] ==
+
== Gene Tiso_gene_19047 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 2559
−
* common name:
+
* transcription direction:
−
** possible_l-galactose-1-phosphate_phosphatase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/3.1.3.93 EC-3.1.3.93]
+
** 1
 +
* centisome position:
 +
** 3.803727600e-2
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[2.4.2.31-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[CPDQT-4]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[L-Galactopyranose]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H2O[c] '''+''' 1 β-L-galactose 1-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 L-galactopyranose[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_11614]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10754]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_15599]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways ==
+
−
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
+
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[athaliana]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=2559}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26349 26349]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=1}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07674 R07674]
+
{{#set: centisome position=3.803727600e-2}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=2.4.2.31-RXN}}
−
{{#set: common name=possible_l-galactose-1-phosphate_phosphatase}}
+
−
{{#set: ec number=EC-3.1.3.93}}
+
−
{{#set: gene associated=Tiso_gene_11614|Tiso_gene_10754|Tiso_gene_15599}}
+
−
{{#set: in pathway=PWY-882}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:19, 21 March 2018

Gene Tiso_gene_19047

  • right end position:
    • 2559
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1
  • centisome position:
    • 3.803727600e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19047&oldid=47734"