Difference between revisions of "4OHBENZOATE-OCTAPRENYLTRANSFER-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_6475 == * left end position: ** 550 * transcription direction: ** NEGATIVE * right end position: ** 2698 * centisome position: ** 4.5111547...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] == * direction: ** LEFT-TO-R...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6475 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] ==
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* left end position:
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* direction:
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** 550
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** 4-hydroxybenzoate_octaprenyltransferase
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* right end position:
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* ec number:
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** 2698
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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* centisome position:
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** 4.5111547   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACYLCOADEHYDROG-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[OCTAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[3-OCTAPRENYL-4-HYDROXYBENZOATE]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 all-trans-octaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-octaprenyl-4-hydroxybenzoate[c]
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* [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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* Gene: [[Tiso_gene_4719]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-11734]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** in-silico_annotation
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== Pathways  ==
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***ec-number
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* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
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* [[RXN-13451]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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** in-silico_annotation
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* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
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***ec-number
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-13615]]
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== Reconstruction information  ==
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** in-silico_annotation
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* Category: [[annotation]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-14131]]
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*** Tool: [[pathwaytools]]
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** in-silico_annotation
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***ec-number
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* [[RXN-14193]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14229]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14262]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14264]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14278]]
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** in-silico_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-16540]]
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** in-silico_annotation
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***ec-number
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* [[RXN-16557]]
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** in-silico_annotation
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***ec-number
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* [[RXN-17775]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17779]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17783]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17784]]
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** in-silico_annotation
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−
***automated-name-match
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* [[RXN-17788]]
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** in-silico_annotation
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−
***automated-name-match
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* [[RXN-17792]]
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** in-silico_annotation
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−
***automated-name-match
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* [[RXN-17796]]
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** in-silico_annotation
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***automated-name-match
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== Pathways associated ==
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[FAO-PWY]]
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* [[PWY-7656]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=550}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27782 27782]
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{{#set: right end position=2698}}
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* LIGAND-RXN:
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{{#set: centisome position=4.5111547    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05615 R05615]
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{{#set: reaction associated=ACYLCOADEHYDROG-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14193|RXN-14229|RXN-14262|RXN-14264|RXN-14278|RXN-16540|RXN-16557|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-7094|PWY-7654|FAO-PWY|PWY-7656}}
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{{#set: common name=4-hydroxybenzoate_octaprenyltransferase}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: gene associated=Tiso_gene_4719}}
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{{#set: in pathway=PWY-6708|PWY-5870}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:19, 21 March 2018

Reaction 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-hydroxybenzoate_octaprenyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic): PWY-6708
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic): PWY-5870
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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