Difference between revisions of "Tiso gene 17879"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16619 RXN-16619] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17879 == * right end position: ** 3358 * transcription direction: ** NEGATIVE * left end position: ** 1868 * centisome position: ** 54.8282...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16619 RXN-16619] ==
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== Gene Tiso_gene_17879 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3358
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* common name:
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* transcription direction:
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** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 1868
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* centisome position:
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** 54.828293   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENYLYLSULFKIN-RXN]]
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** 1 [[3R-5Z-3-hydroxy-tetradec-5-enoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2E-5Z-tetradeca-2-5-dienoyl-ACPs]][c]
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** Source: [[orthology-synechocystis]]
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* With common name(s):
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* Reaction: [[INORGPYROPHOSPHAT-RXN]]
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** 1 a (3R,5Z)-3-hydroxy-tetradec-5-enoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a (2E,5Z)-tetradeca-2,5-dienoyl-[acp][c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[SULFATE-ADENYLYLTRANS-RXN]]
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* [[Tiso_gene_6884]]
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** Source: [[orthology-esiliculosus]]
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** EXPERIMENTAL_ANNOTATION
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[DISSULFRED-PWY]]
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== Pathways  ==
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* [[PWY-5340]]
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* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
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* [[PWY-5278]]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7805]]
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== Reconstruction information  ==
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* [[PWY-7807]]
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* [[annotation]]:
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* [[SULFMETII-PWY]]
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** [[pathwaytools]]:
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* [[PWY-6683]]
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*** [[experimental_annotation]]
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* [[P224-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3358}}
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{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: left end position=1868}}
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{{#set: gene associated=Tiso_gene_6884}}
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{{#set: centisome position=54.828293    }}
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{{#set: in pathway=PWY-7664}}
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{{#set: reaction associated=ADENYLYLSULFKIN-RXN|INORGPYROPHOSPHAT-RXN|SULFATE-ADENYLYLTRANS-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=DISSULFRED-PWY|PWY-5340|PWY-5278|PWY-7805|PWY-7807|SULFMETII-PWY|PWY-6683|P224-PWY}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_17879

  • right end position:
    • 3358
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 1868
  • centisome position:
    • 54.828293
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17879&oldid=47805"