Difference between revisions of "SEDOBISALDOL-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_15802 == * left end position: ** 270 * transcription direction: ** NEGATIVE * right end position: ** 3238 * centisome position: ** 3.285071...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_15802 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOBISALDOL-RXN SEDOBISALDOL-RXN] ==
* left end position:
+
* direction:
** 270
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** REVERSIBLE
* transcription direction:
+
* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/4.1.2 EC-4.1.2]
* right end position:
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** 3238
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* centisome position:
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** 3.2850714   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[R95]]
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* With identifiers:
** [[pantograph]]-[[synechocystis]]
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** 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''<=>''' 1 [[D-SEDOHEPTULOSE-1-7-P2]][c]
* [[R96]]
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* With common name(s):
** [[pantograph]]-[[synechocystis]]
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** 1 D-erythrose 4-phosphate[c] '''+''' 1 glycerone phosphate[c] '''<=>''' 1 D-sedoheptulose-1,7-bisphosphate[c]
* [[RXN-8042]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
== Pathways associated ==
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* Gene: [[Tiso_gene_14568]]
* [[PWY-6475]]
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** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_9179]]
 +
** Source: [[orthology-synechocystis]]
 +
* Gene: [[Tiso_gene_65]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_12272]]
 +
** Source: [[orthology-synechocystis]]
 +
== Pathways ==
 +
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY0-1517]], sedoheptulose bisphosphate bypass: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1517 PWY0-1517]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=270}}
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* RHEA:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30167 30167]
{{#set: right end position=3238}}
+
* LIGAND-RXN:
{{#set: centisome position=3.2850714    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01829 R01829]
{{#set: reaction associated=R95|R96|RXN-8042}}
+
{{#set: direction=REVERSIBLE}}
{{#set: pathway associated=PWY-6475}}
+
{{#set: ec number=EC-4.1.2}}
 +
{{#set: gene associated=Tiso_gene_14568|Tiso_gene_9179|Tiso_gene_65|Tiso_gene_12272}}
 +
{{#set: in pathway=CALVIN-PWY|PWY0-1517}}
 +
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|manual-primary_network|orthology-synechocystis}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 21:20, 21 March 2018

Reaction SEDOBISALDOL-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY0-1517, sedoheptulose bisphosphate bypass: PWY0-1517
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links