Difference between revisions of "RIBOSYN2-PWY"

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(Created page with "Category:Gene == Gene Tiso_gene_14360 == * left end position: ** 2962 * transcription direction: ** POSITIVE * right end position: ** 4599 * centisome position: ** 51.9740...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-330...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_14360 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] ==
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* left end position:
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* taxonomic range:
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** 2962
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** POSITIVE
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* common name:
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* right end position:
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** flavin biosynthesis I (bacteria and plants)
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** 4599
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* centisome position:
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** 51.97403   
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* Synonym(s):
 
* Synonym(s):
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** riboflavin, FMN and FAD biosynthesis
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** vitamin B2 biosynthesis
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[RXN-15556]]
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'''7''' reactions found over '''9''' reactions in the full pathway
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** in-silico_annotation
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* [[DIOHBUTANONEPSYN-RXN]]
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***ec-number
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** 2 associated gene(s):
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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*** [[Tiso_gene_14275]]
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** in-silico_annotation
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*** [[Tiso_gene_19932]]
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***ec-number
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** 2 reconstruction source(s) associated:
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== Pathways associated ==
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*** [[annotation-in-silico_annotation]]
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* [[PWY-7511]]
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*** [[orthology-esiliculosus]]
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* [[FADSYN-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_5393]]
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*** [[Tiso_gene_5392]]
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*** [[Tiso_gene_7479]]
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*** [[Tiso_gene_1086]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[GTP-CYCLOHYDRO-II-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14275]]
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*** [[Tiso_gene_19932]]
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*** [[Tiso_gene_8035]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVIN-SYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13686]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVINKIN-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_7479]]
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*** [[Tiso_gene_16837]]
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*** [[Tiso_gene_1086]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVINSYNDEAM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1389]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVINSYNREDUC-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_8035]]
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*** [[Tiso_gene_1389]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RIBOPHOSPHAT-RXN RIBOPHOSPHAT-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2962}}
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* ECOCYC:
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{{#set: transcription direction=POSITIVE}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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{{#set: right end position=4599}}
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* ARACYC:
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{{#set: centisome position=51.97403    }}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=flavin biosynthesis I (bacteria and plants)}}
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{{#set: common name=riboflavin, FMN and FAD biosynthesis|vitamin B2 biosynthesis}}
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{{#set: reaction found=7}}
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{{#set: total reaction=9}}
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{{#set: completion rate=78.0}}

Latest revision as of 19:12, 21 March 2018

Pathway RIBOSYN2-PWY

  • taxonomic range:
  • common name:
    • flavin biosynthesis I (bacteria and plants)
  • Synonym(s):
    • riboflavin, FMN and FAD biosynthesis
    • vitamin B2 biosynthesis

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBOSYN2-PWY&oldid=40133"