Difference between revisions of "METHYL-MALONYL-COA"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYL-MALONYL-COA METHYL-MALONYL-COA] == * smiles: ** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYL-MALONYL-COA METHYL-MALONYL-COA] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O
 
* common name:
 
* common name:
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** ferredoxin-dependent_glutamate_synthase
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** (R)-methylmalonyl-CoA
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/1.4.7.1 EC-1.4.7.1]
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** InChIKey=MZFOKIKEPGUZEN-AGCMQPJKSA-I
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* molecular weight:
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** 862.568   
 
* Synonym(s):
 
* Synonym(s):
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** L-methylmalonyl-CoA
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** methylmalonyl-CoA
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** methyl-malonyl-coenzyme A
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** CH3-malonyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GLN]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[GLT]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[METHYLMALONYL-COA-MUT-RXN]]
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** 1 L-glutamine[c] '''+''' 1 2-oxoglutarate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 2 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1773]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2581]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1154]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-4341]], L-glutamate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4341 PWY-4341]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?R00021 R00021]
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** [http://www.genome.jp/dbget-bin/www_bget?C01213 C01213]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P23225 P23225]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57326 57326]
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** [http://www.uniprot.org/uniprot/O67512 O67512]
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* METABOLIGHTS : MTBLC57326
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** [http://www.uniprot.org/uniprot/P96218 P96218]
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* BIGG : mmcoa__R
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** [http://www.uniprot.org/uniprot/Q06434 Q06434]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q43081 Q43081]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266560 45266560]
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** [http://www.uniprot.org/uniprot/P55037 P55037]
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{{#set: smiles=CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O}}
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** [http://www.uniprot.org/uniprot/Q43155 Q43155]
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{{#set: common name=(R)-methylmalonyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q7M242 Q7M242]
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{{#set: inchi key=InChIKey=MZFOKIKEPGUZEN-AGCMQPJKSA-I}}
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** [http://www.uniprot.org/uniprot/P51375 P51375]
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{{#set: molecular weight=862.568    }}
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** [http://www.uniprot.org/uniprot/P55038 P55038]
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{{#set: common name=L-methylmalonyl-CoA|methylmalonyl-CoA|methyl-malonyl-coenzyme A|CH3-malonyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9SLM4 Q9SLM4]
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{{#set: reversible reaction associated=METHYLMALONYL-COA-MUT-RXN}}
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** [http://www.uniprot.org/uniprot/Q08258 Q08258]
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** [http://www.uniprot.org/uniprot/O49154 O49154]
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** [http://www.uniprot.org/uniprot/O19906 O19906]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ferredoxin-dependent_glutamate_synthase}}
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{{#set: ec number=EC-1.4.7.1}}
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{{#set: gene associated=Tiso_gene_1773|Tiso_gene_2581|Tiso_gene_1154}}
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{{#set: in pathway=PWY-6964|PWY-4341|PWY-6549}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:21, 21 March 2018

Metabolite METHYL-MALONYL-COA

  • smiles:
    • CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O
  • common name:
    • (R)-methylmalonyl-CoA
  • inchi key:
    • InChIKey=MZFOKIKEPGUZEN-AGCMQPJKSA-I
  • molecular weight:
    • 862.568
  • Synonym(s):
    • L-methylmalonyl-CoA
    • methylmalonyl-CoA
    • methyl-malonyl-coenzyme A
    • CH3-malonyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O" cannot be used as a page name in this wiki.



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