Difference between revisions of "HISTPRATPHYD-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_6952 == * left end position: ** 2786 * transcription direction: ** POSITIVE * right end position: ** 5460 * centisome position: ** 23.90800...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme....")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_6952 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] ==
−
* left end position:
+
* direction:
−
** 2786
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** POSITIVE
+
** [http://enzyme.expasy.org/EC/3.6.1.31 EC-3.6.1.31]
−
* right end position:
+
−
** 5460
+
−
* centisome position:
+
−
** 23.908007   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[HYDROXYPYRROLINEDEH-RXN]]
+
* With identifiers:
−
** [[pantograph]]-[[synechocystis]]
+
** 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PHOSPHORIBOSYL-AMP]][c]
−
* [[PYRROLINECARBDEHYDROG-RXN]]
+
* With common name(s):
−
** [[pantograph]]-[[synechocystis]]
+
** 1 1-(5-phospho-β-D-ribosyl)-ATP[c] '''+''' 1 H2O[c] '''=>''' 1 diphosphate[c] '''+''' 2 H+[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c]
−
* [[RXN-14116]]
+
 
−
** [[pantograph]]-[[synechocystis]]
+
== Genes associated with this reaction  ==
−
* [[SSNOm]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_11297]]
−
* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
+
** Source: [[orthology-athaliana]]
−
** in-silico_annotation
+
** Source: [[orthology-synechocystis]]
−
***ec-number
+
** Source: [[orthology-esiliculosus]]
−
** experimental_annotation
+
** Source: [[orthology-creinhardtii]]
−
***ec-number
+
== Pathways ==
−
** [[pantograph]]-[[creinhardtii]]
+
* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
−
* [[SUCCSEMIALDDEHYDROG-RXN]]
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
** [[pantograph]]-[[synechocystis]]
+
== Reconstruction information  ==
−
== Pathways associated ==
+
* Category: [[orthology]]
−
* [[ARGASEDEG-PWY]]
+
** Source: [[orthology-athaliana]]
−
* [[PWY-6853]]
+
*** Tool: [[pantograph]]
−
* [[PWY-4321]]
+
** Source: [[orthology-creinhardtii]]
−
* [[PROUT-PWY]]
+
*** Tool: [[pantograph]]
−
* [[P181-PWY]]
+
** Source: [[orthology-synechocystis]]
−
* [[PWY-6993]]
+
*** Tool: [[pantograph]]
−
* [[PWY-6537]]
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-6473]]
+
*** Tool: [[pantograph]]
−
* [[PWY-6535]]
+
* Category: [[manual]]
−
* [[GLUDEG-I-PWY]]
+
** Source: [[manual-primary_network]]
−
* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]]
+
−
* [[P105-PWY]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2786}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
−
{{#set: right end position=5460}}
+
* LIGAND-RXN:
−
{{#set: centisome position=23.908007    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
−
{{#set: reaction associated=HYDROXYPYRROLINEDEH-RXN|PYRROLINECARBDEHYDROG-RXN|RXN-14116|SSNOm|SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN|SUCCSEMIALDDEHYDROG-RXN}}
+
* UNIPROT:
−
{{#set: pathway associated=ARGASEDEG-PWY|PWY-6853|PWY-4321|PROUT-PWY|P181-PWY|PWY-6993|PWY-6537|PWY-6473|PWY-6535|GLUDEG-I-PWY|3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|P105-PWY}}
+
** [http://www.uniprot.org/uniprot/P44434 P44434]
 +
** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
 +
** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
 +
** [http://www.uniprot.org/uniprot/Q02130 Q02130]
 +
** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
 +
** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
 +
** [http://www.uniprot.org/uniprot/O34912 O34912]
 +
** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
 +
** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
 +
** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
 +
** [http://www.uniprot.org/uniprot/Q57750 Q57750]
 +
** [http://www.uniprot.org/uniprot/O27344 O27344]
 +
** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
 +
** [http://www.uniprot.org/uniprot/O67780 O67780]
 +
** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
 +
** [http://www.uniprot.org/uniprot/P26722 P26722]
 +
** [http://www.uniprot.org/uniprot/P45353 P45353]
 +
** [http://www.uniprot.org/uniprot/Q12670 Q12670]
 +
** [http://www.uniprot.org/uniprot/P50935 P50935]
 +
** [http://www.uniprot.org/uniprot/P00815 P00815]
 +
** [http://www.uniprot.org/uniprot/P07685 P07685]
 +
** [http://www.uniprot.org/uniprot/O59667 O59667]
 +
** [http://www.uniprot.org/uniprot/O82768 O82768]
 +
** [http://www.uniprot.org/uniprot/P10367 P10367]
 +
** [http://www.uniprot.org/uniprot/P06989 P06989]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-3.6.1.31}}
 +
{{#set: gene associated=Tiso_gene_11297}}
 +
{{#set: in pathway=HISTSYN-PWY}}
 +
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus|manual-primary_network}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:21, 21 March 2018

Reaction HISTPRATPHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HISTPRATPHYD-RXN&oldid=48088"