Difference between revisions of "SPHINGANINE-KINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12392 RXN-12392] == * direction: ** REVERSIBLE * common name: ** thymidine_phosphorylase * ec n...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12392 RXN-12392] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPHINGANINE-KINASE-RXN SPHINGANINE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** thymidine_phosphorylase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
+
** [http://enzyme.expasy.org/EC/2.7.1.91 EC-2.7.1.91]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Linear-Malto-Oligosaccharides]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[Linear-Malto-Oligosaccharides]][c] '''+''' 1 [[GLC-1-P]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[CPD-13612]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-649]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a linear malto-oligosaccharide[c] '''+''' 1 phosphate[c] '''<=>''' 1 a linear malto-oligosaccharide[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c]
+
** 1 ATP[c] '''+''' 1 D-erythro-sphinganine[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 sphinganine 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1011]]
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* Gene: [[Tiso_gene_1163]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
+
* Gene: [[Tiso_gene_14560]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=thymidine_phosphorylase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15465 15465]
−
{{#set: ec number=EC-2.4.1.1}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_1011}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02976 R02976]
−
{{#set: in pathway=}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: ec number=EC-2.7.1.91}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: gene associated=Tiso_gene_1163|Tiso_gene_14560}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: in pathway=PWY-5129|PWY-7119}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:22, 21 March 2018

Reaction SPHINGANINE-KINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 D-erythro-sphinganine[c] => 1 ADP[c] + 1 H+[c] + 1 sphinganine 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5129, sphingolipid biosynthesis (plants): PWY-5129
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-7119, sphingolipid recycling and degradation (yeast): PWY-7119
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




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