Difference between revisions of "Tiso gene 2485"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16415 RXN-16415] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** long_ch...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2485 == * right end position: ** 5826 * transcription direction: ** NEGATIVE * left end position: ** 3231 * centisome position: ** 16.80362...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16415 RXN-16415] ==
+
== Gene Tiso_gene_2485 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 5826
−
* common name:
+
* transcription direction:
−
** polyketide_synthase
+
** NEGATIVE
−
** long_chain_acyl-_synthetase
+
* left end position:
−
** acyl-_synthetase
+
** 3231
−
** ORF
+
* centisome position:
−
* ec number:
+
** 16.80362   
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ARGSUCCINLYA-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[Very-long-chain-fatty-acids]][c] '''<=>''' 1 [[VERY-LONG-CHAIN-FATTY-ACYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 a very-long-chain fatty acid[c] '''<=>''' 1 a very long chain fatty acyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-athaliana]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-synechocystis]]
−
* [[Tiso_gene_348]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
* Reaction: [[RXN-22]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: ec-number
−
* [[Tiso_gene_4191]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
** EXPERIMENTAL_ANNOTATION
+
== Pathways associated ==
−
***EC-NUMBER
+
* [[PWY-5154]]
−
* [[Tiso_gene_10876]]
+
* [[PWY-5]]
−
** IN-SILICO_ANNOTATION
+
* [[ARGSYN-PWY]]
−
***EC-NUMBER
+
* [[PWY-4984]]
−
* [[Tiso_gene_136]]
+
* [[ARGSYNBSUB-PWY]]
−
** IN-SILICO_ANNOTATION
+
* [[PWY-4983]]
−
***EC-NUMBER
+
* [[PWY-7400]]
−
* [[Tiso_gene_7855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
{{#set: right end position=5826}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
{{#set: left end position=3231}}
−
{{#set: common name=acyl-_synthetase}}
+
{{#set: centisome position=16.80362    }}
−
{{#set: common name=ORF}}
+
{{#set: reaction associated=ARGSUCCINLYA-RXN|RXN-22}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: pathway associated=PWY-5154|PWY-5|ARGSYN-PWY|PWY-4984|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
−
{{#set: gene associated=Tiso_gene_348|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_7855|Tiso_gene_13394|Tiso_gene_9394|Tiso_gene_135|Tiso_gene_500}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:22, 21 March 2018

Gene Tiso_gene_2485

  • right end position:
    • 5826
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3231
  • centisome position:
    • 16.80362
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2485&oldid=48244"