Difference between revisions of "RXN66-478"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Containing-5AminoMe-2-ThioUrdines tRNA-Containing-5AminoMe-2-ThioUrdines] == * common name...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-478 RXN66-478] == * direction: ** LEFT-TO-RIGHT * common name: ** phytol dehydrogenase ** pol...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Containing-5AminoMe-2-ThioUrdines tRNA-Containing-5AminoMe-2-ThioUrdines] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-478 RXN66-478] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a 5-aminomethyl-2-thiouridine in tRNA
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** phytol dehydrogenase
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** polyketide_synthase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** a tRNA containing 5-aminomethyl-2-thiouridine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN0-5144]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NAD]][c] '''+''' 1 [[PHYTOL]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14926]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 NAD+[c] '''+''' 1 phytol[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 phytenal[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7649]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6563]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6562]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5425]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5424]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY66-389]], phytol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a 5-aminomethyl-2-thiouridine in tRNA}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=a tRNA containing 5-aminomethyl-2-thiouridine}}
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{{#set: common name=phytol dehydrogenase}}
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{{#set: consumed by=RXN0-5144}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.1.1.1}}
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{{#set: gene associated=Tiso_gene_7649|Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_5425|Tiso_gene_5424}}
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{{#set: in pathway=PWY66-389}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:23, 21 March 2018

Reaction RXN66-478

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phytol dehydrogenase
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 phytol[c] => 1 NADH[c] + 1 H+[c] + 1 phytenal[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-389, phytol degradation: PWY66-389
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-478&oldid=48376"