Difference between revisions of "ADPREDUCT-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ADP reductase ** ri...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ADP reductase
 +
** ribonucleoside-diphosphate_reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.46 EC-3.1.3.46]
+
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-535]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
+
** 1 [[ADP]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[DADP]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 β-D-fructose 2,6-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 β-D-fructofuranose 6-phosphate[c]
+
** 1 ADP[c] '''+''' 1 a reduced thioredoxin[c] '''=>''' 1 H2O[c] '''+''' 1 dADP[c] '''+''' 1 an oxidized thioredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15398]]
+
* Gene: [[Tiso_gene_9916]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_2100]]
+
** Source: [[orthology-synechocystis]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_10617]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_893]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_892]]
+
** Source: [[orthology-synechocystis]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_10138]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9915]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-423 PWY66-423]
+
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[athaliana]]
+
** Source: [[orthology-synechocystis]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17289 17289]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28034 28034]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00763 R00763]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02017 R02017]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P26285 P26285]
+
−
** [http://www.uniprot.org/uniprot/P25114 P25114]
+
−
** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]
+
−
** [http://www.uniprot.org/uniprot/P49872 P49872]
+
−
** [http://www.uniprot.org/uniprot/Q28830 Q28830]
+
−
** [http://www.uniprot.org/uniprot/Q91348 Q91348]
+
−
** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]
+
−
** [http://www.uniprot.org/uniprot/Q16875 Q16875]
+
−
** [http://www.uniprot.org/uniprot/P07953 P07953]
+
−
** [http://www.uniprot.org/uniprot/P16118 P16118]
+
−
** [http://www.uniprot.org/uniprot/P32604 P32604]
+
−
** [http://www.uniprot.org/uniprot/P70265 P70265]
+
−
** [http://www.uniprot.org/uniprot/P70266 P70266]
+
−
** [http://www.uniprot.org/uniprot/O24559 O24559]
+
−
** [http://www.uniprot.org/uniprot/O81398 O81398]
+
−
** [http://www.uniprot.org/uniprot/O64983 O64983]
+
−
** [http://www.uniprot.org/uniprot/Q9URZ7 Q9URZ7]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.1.3.46}}
+
{{#set: common name=ADP reductase}}
−
{{#set: gene associated=Tiso_gene_15398|Tiso_gene_2100|Tiso_gene_893|Tiso_gene_892}}
+
{{#set: common name=ribonucleoside-diphosphate_reductase}}
−
{{#set: in pathway=PWY66-423}}
+
{{#set: ec number=EC-1.17.4.1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_9916|Tiso_gene_10617|Tiso_gene_10138|Tiso_gene_9915}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-7220|PWY-7227}}
−
{{#set: reconstruction source=creinhardtii|athaliana}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 21:24, 21 March 2018

Reaction ADPREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ADP reductase
    • ribonucleoside-diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ADP[c] + 1 a reduced thioredoxin[c] => 1 H2O[c] + 1 dADP[c] + 1 an oxidized thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7220, adenosine deoxyribonucleotides de novo biosynthesis II: PWY-7220
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7227, adenosine deoxyribonucleotides de novo biosynthesis: PWY-7227
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ADPREDUCT-RXN&oldid=48482"